RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 LIPJQ5W064 366 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 GTF2H2CQ6P1K8 395 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 METTL2BQ6P1Q9 378 aaKnown RBP13.71□□□□□ -0.21
ERCC1-203ENST00000340192 ADGRD1Q6QNK2 874 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 UBE3DQ7Z6J8 389 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 CYP4X1Q8N118 509 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 RNF175Q8N4F7 328 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 PTGR2Q8N8N7 351 aaPredicted RBP13.71□□□□□ -0.21
ERCC1-203ENST00000340192 FAM47BQ8NA70 645 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 PHF21BQ96EK2 531 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 KCNC2Q96PR1 638 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 EPB41L4BQ9H329 900 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 IPPKQ9H8X2 491 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 ACTR8Q9H981 624 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 KCNK13Q9HB14 408 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 MMP25Q9NPA2 562 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 NECTIN3Q9NQS3 549 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 PRDM7Q9NQW5 492 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 ASF1BQ9NVP2 202 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 STMN3Q9NZ72 180 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 TEKT2Q9UIF3 430 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 TMCO1Q9UM00 188 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 COPG1Q9Y678 874 aaKnown RBP13.71□□□□□ -0.21
ERCC1-203ENST00000340192 CNTRLQ7Z7A1 2325 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 TCRBV16S1A1N1A0A5B0 115 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 TCP11X1B4DZS4 312 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 SAP18O00422 153 aaKnown RBP13.7□□□□□ -0.22
ERCC1-203ENST00000340192 SMIM24O75264 130 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 WDPCPO95876 746 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 TGFB1P01137 390 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 MYBL2P10244 700 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 TSFMP43897 325 aaKnown RBP13.7□□□□□ -0.22
ERCC1-203ENST00000340192 PIK3CGP48736 1102 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 TNFSF10P50591 281 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 HNRNPFP52597 415 aaKnown RBP13.7□□□□□ -0.22
ERCC1-203ENST00000340192 LIM2P55344 173 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 DDX39BQ13838 428 aaKnown RBP13.7□□□□□ -0.22
ERCC1-203ENST00000340192 TMEM35AQ53FP2 167 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 TEX35Q5T0J7 233 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 FCRLBQ6BAA4 426 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 H3F3CQ6NXT2 135 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 ZNF793Q6ZN11 406 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 TIFABQ6ZNK6 161 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 CHSY3Q70JA7 882 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 SCUBE1Q8IWY4 988 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 EIF1ADQ8N9N8 165 aaKnown RBP13.7□□□□□ -0.22
ERCC1-203ENST00000340192 TMEM52Q8NDY8 209 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 SRFBP1Q8NEF9 429 aaKnown RBP13.7□□□□□ -0.22
ERCC1-203ENST00000340192 ARMC2Q8NEN0 867 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 OR1N1Q8NGS0 311 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 HUS1BQ8NHY5 278 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 ADAMTS18Q8TE60 1221 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 HAS2Q92819 552 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 MTBPQ96DY7 904 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 CMTM7Q96FZ5 175 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 MTERF1Q99551 399 aaKnown RBP13.7□□□□□ -0.22
ERCC1-203ENST00000340192 MRPL57Q9BQC6 102 aaKnown RBP13.7□□□□□ -0.22
ERCC1-203ENST00000340192 TBCDQ9BTW9 1192 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 ADGRE2Q9UHX3 823 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 DAPP1Q9UN19 280 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 NTNG1Q9Y2I2 539 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 MMACHCQ9Y4U1 282 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 PCDHGA11Q9Y5H2 935 aa13.7□□□□□ -0.22
ERCC1-203ENST00000340192 SAGE2PA6NJ88 616 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 H0YIV9 168 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 STX16-NPEPL1H3BU86 382 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 RTCAO00442 366 aaKnown RBP13.69□□□□□ -0.22
ERCC1-203ENST00000340192 CYR61O00622 381 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 CLDN4O14493 209 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 OR7A17O14581 309 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 STX16O14662 325 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 UGDHO60701 494 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 ATP5A1P25705 553 aaKnown RBP13.69□□□□□ -0.22
ERCC1-203ENST00000340192 PIK3CBP42338 1070 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 HSD17B7P56937 341 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 CPSF6Q16630 551 aaKnown RBP eCLIP13.69□□□□□ -0.22
ERCC1-203ENST00000340192 ACER2Q5QJU3 275 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 KHDRBS2Q5VWX1 349 aaKnown RBP13.69□□□□□ -0.22
ERCC1-203ENST00000340192 ACOT4Q8N9L9 421 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 CSF3RQ99062 836 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 BARD1Q99728 777 aaKnown RBP13.69□□□□□ -0.22
ERCC1-203ENST00000340192 SLC29A3Q9BZD2 475 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 ROGDIQ9GZN7 287 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 RNF32Q9H0A6 362 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.69□□□□□ -0.22
ERCC1-203ENST00000340192 MRPL46Q9H2W6 279 aaKnown RBP13.69□□□□□ -0.22
ERCC1-203ENST00000340192 OR51B5Q9H339 312 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 NOL11Q9H8H0 719 aaKnown RBP13.69□□□□□ -0.22
ERCC1-203ENST00000340192 DMRT3Q9NQL9 472 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 PRTFDC1Q9NRG1 225 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 KCMF1Q9P0J7 381 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 PCTPQ9UKL6 214 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 MRPS33Q9Y291 106 aaKnown RBP13.69□□□□□ -0.22
ERCC1-203ENST00000340192 RNF11Q9Y3C5 154 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 TSC22D4Q9Y3Q8 395 aa13.69□□□□□ -0.22
ERCC1-203ENST00000340192 SETXQ7Z333 2677 aaKnown RBP13.68□□□□□ -0.22
ERCC1-203ENST00000340192 TRAV17A0A0B4J275 112 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 CLEC18AA5D8T8 446 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 A8MUA0 341 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 TGFBR3LH3BV60 316 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms