RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 RPS6KA2Q15349 733 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 NDUFA9Q16795 377 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 MUM1Q2TAK8 710 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 C6orf89Q6UWU4 347 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 TRPM8Q7Z2W7 1104 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 FUNDC1Q8IVP5 155 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 TM4SF18Q96CE8 201 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 RNF31Q96EP0 1072 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 SERINC2Q96SA4 455 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 CMKLR1Q99788 373 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 CTRCQ99895 268 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 STRADBQ9C0K7 418 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 ROGDIQ9GZN7 287 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 COPS7BQ9H9Q2 264 aaPredicted RBP20.38■□□□□ 0.85
TPM1-204ENST00000334895 ANKHQ9HCJ1 492 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 MYNNQ9NPC7 610 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 ZIM2Q9NZV7 527 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 ASB4Q9Y574 426 aa20.38■□□□□ 0.85
TPM1-204ENST00000334895 FER1L5A0AVI2 2057 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 B4E171 279 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 TMX2-CTNND1H3BSU7 103 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 PSMD12O00232 456 aaPredicted RBP20.37■□□□□ 0.85
TPM1-204ENST00000334895 LRATO95237 230 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 FAM58BPP0C7Q3 252 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 PIK3R1P27986 724 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 TSPAN7P41732 249 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 CLDN8P56748 225 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 TAS2R50P59544 299 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 IRX1P78414 480 aaPredicted RBP20.37■□□□□ 0.85
TPM1-204ENST00000334895 RUNX2Q13950 521 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 FAM91A1Q658Y4 838 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 PWWP2BQ6NUJ5 590 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 RIMKLAQ8IXN7 391 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 MMP21Q8N119 569 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 OR5T3Q8NGG3 340 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 CDC26Q8NHZ8 85 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 FBXO8Q9NRD0 319 aa20.37■□□□□ 0.85
TPM1-204ENST00000334895 TEX10Q9NXF1 929 aaPredicted RBP20.37■□□□□ 0.85
TPM1-204ENST00000334895 DHCR7Q9UBM7 475 aaKnown RBP20.37■□□□□ 0.85
TPM1-204ENST00000334895 TMEM184BQ9Y519 407 aaPredicted RBP20.37■□□□□ 0.85
TPM1-204ENST00000334895 ARHGAP10A1A4S6 786 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 RDH16O75452 317 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 IL3P08700 152 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 ITIH1P19827 911 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 JAK1P23458 1154 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 ETV5P41161 510 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 IL11RAQ14626 422 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 SLC9A5Q14940 896 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 FAM214AQ32MH5 1076 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 FAM71E1Q6IPT2 247 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 TTLL10Q6ZVT0 673 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 RAB11FIP2Q7L804 512 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 PPP1R3BQ86XI6 285 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 METTL27Q8N6F8 245 aaPredicted RBP20.36■□□□□ 0.85
TPM1-204ENST00000334895 GFM2Q969S9 779 aaKnown RBP20.36■□□□□ 0.85
TPM1-204ENST00000334895 MAPKAP1Q9BPZ7 522 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 KCMF1Q9P0J7 381 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 ATG4BQ9Y4P1 393 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 CAPN7Q9Y6W3 813 aa20.36■□□□□ 0.85
TPM1-204ENST00000334895 A0A088AWK7 358 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 CCT8L1PA6NM43 557 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 POLR1CO15160 346 aaPredicted RBP20.35■□□□□ 0.85
TPM1-204ENST00000334895 B3GALT2O43825 422 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 SLC22A3O75751 556 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 NSA2O95478 260 aaKnown RBP20.35■□□□□ 0.85
TPM1-204ENST00000334895 ITGAXP20702 1163 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 ZNF10P21506 573 aaPredicted RBP20.35■□□□□ 0.85
TPM1-204ENST00000334895 ASMTP46597 345 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 TRA2BP62995 288 aaKnown RBP20.35■□□□□ 0.85
TPM1-204ENST00000334895 MC1RQ01726 317 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 AGKQ53H12 422 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 YOD1Q5VVQ6 348 aaPredicted RBP20.35■□□□□ 0.85
TPM1-204ENST00000334895 SLC38A9Q8NBW4 561 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 NDC1Q9BTX1 674 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 DPY30Q9C005 99 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 CCDC167Q9P0B6 97 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 FBXW2Q9UKT8 454 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 A0A1W2PR48 441 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 SLC22A2O15244 555 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 AKAP10O43572 662 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 SCRG1O75711 98 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 ADSLP30566 484 aaPredicted RBP20.35■□□□□ 0.85
TPM1-204ENST00000334895 LIM2P55344 173 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 C21orf58P58505 322 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 GK5Q6ZS86 529 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 BPHLQ86WA6 291 aaPredicted RBP20.35■□□□□ 0.85
TPM1-204ENST00000334895 TMEM126BQ8IUX1 230 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 UCN3Q969E3 161 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 AKAP7Q9P0M2 348 aaPredicted RBP20.35■□□□□ 0.85
TPM1-204ENST00000334895 DAPP1Q9UN19 280 aa20.35■□□□□ 0.85
TPM1-204ENST00000334895 SEC16AO15027 2179 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 DSCR3O14972 297 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 PRKRAO75569 313 aaKnown RBP20.34■□□□□ 0.85
TPM1-204ENST00000334895 ARSFP54793 590 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 KLC1Q07866 573 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 UGT8Q16880 541 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.34■□□□□ 0.85
TPM1-204ENST00000334895 RHBDD2Q6NTF9 364 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 CYB5D1Q6P9G0 228 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 IKBIPQ70UQ0 350 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms