RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 Q6ZVL8 140 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 Q6ZVU0 165 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 MARCH9Q86YJ5 346 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 PSD4Q8NDX1 1056 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 OVCA2Q8WZ82 227 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 RAB8BQ92930 207 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 FCRL4Q96PJ5 515 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 WRAP53Q9BUR4 548 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 ASAH2Q9NR71 780 aa12.25□□□□□ -0.45
DNMT3A-202ENST00000321117 C2orf78A6NCI8 922 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 KCNK5O95279 499 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 TSPAN12O95859 305 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 TNFSF8P32971 234 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 TGFBR1P36897 503 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 YBX1P67809 324 aaKnown RBP12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 TGM3Q08188 693 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 PLAG1Q6DJT9 500 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 C22orf42Q6IC83 251 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 GDPD4Q6W3E5 623 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 COL26A1Q96A83 441 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 SLC35G5Q96KT7 338 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 CENPOQ9BU64 300 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 CARS2Q9HA77 564 aaKnown RBP12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 ZCCHC3Q9NUD5 404 aaKnown RBP12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 STUB1Q9UNE7 303 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 PRAMEF33A0A0G2JMD5 474 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 PRAMEF10O60809 474 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 PRG2P13727 222 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 MAB21L1Q13394 359 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 CLLU1OSQ5K130 101 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 C9orf64Q5T6V5 341 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 C22orf39Q6P5X5 142 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 SLC16A12Q6ZSM3 486 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 CXXC5Q7LFL8 322 aaKnown RBP12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 KLHDC8BQ8IXV7 354 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 CMTM8Q8IZV2 173 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 OR52N2Q8NGI0 321 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 HUS1BQ8NHY5 278 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 INIPQ9NRY2 104 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 CLCA3PQ9Y6N3 262 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 A0A1B0GW55 424 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 TTC34A8MYJ7 566 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 PRLP01236 227 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 PTHP01270 115 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 DUX4L2P0CJ85 424 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 DUX4L3P0CJ86 424 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 DUX4L4P0CJ87 422 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 DUX4L5P0CJ88 424 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 DUX4L6P0CJ89 424 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 DUX4L7P0CJ90 424 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 ZNF24P17028 368 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 SMSP52788 366 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 PTGES3Q15185 160 aaKnown RBP12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 MORN1Q5T089 497 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 LRIF1Q5T3J3 769 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 APCDD1Q8J025 514 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 CELF2-AS1Q8N7Q2 184 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 LILRB4Q8NHJ6 448 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 SETD6Q8TBK2 473 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 RHNO1Q9BSD3 238 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 RACGAP1Q9H0H5 632 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 EQTNQ9NQ60 294 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 DUX4Q9UBX2 424 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 PHF11Q9UIL8 331 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 BTNL2Q9UIR0 455 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 NDRG4Q9ULP0 352 aaKnown RBP12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 CLEC4AQ9UMR7 237 aa12.24□□□□□ -0.45
DNMT3A-202ENST00000321117 E7EQ34 232 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 APOL3O95236 402 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 IL1RNP18510 177 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 RCVRNP35243 200 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 MAP2K3P46734 347 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 MASP1P48740 699 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 STK19P49842 368 aaPredicted RBP12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 CSTF1Q05048 431 aaKnown RBP12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 RNASE12Q5GAN4 147 aaKnown RBP12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 ATAT1Q5SQI0 421 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 CATSPEREQ5SY80 951 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 NRARPQ7Z6K4 114 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 GPR26Q8NDV2 337 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 ZNF461Q8TAF7 563 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 RAD51AP1Q96B01 352 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 YIPF6Q96EC8 236 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 MS4A4AQ96JQ5 239 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 PSD2Q9BQI7 771 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 A3GALT2U3KPV4 340 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 SMAD6O43541 496 aaKnown RBP12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 CCR7P32248 378 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 GINS1Q14691 196 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 CLEC12AQ5QGZ9 265 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 GDPGP1Q6ZNW5 385 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 CTRCQ99895 268 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 ACTL8Q9H568 366 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 RRAGCQ9HB90 399 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 NUFIP1Q9UHK0 495 aaKnown RBP12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 MYO10Q9HD67 2058 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 UPK1AO00322 258 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 RAB36O95755 333 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 SOX3P41225 446 aa12.23□□□□□ -0.45
DNMT3A-202ENST00000321117 MRPL19P49406 292 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms