RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 GALNT11Q8NCW6 608 aa27.41■■□□□ 1.98
SYNGR1-202ENST00000318801 ZNF473Q8WTR7 871 aaKnown RBP27.41■■□□□ 1.98
SYNGR1-202ENST00000318801 TSLPQ969D9 159 aa27.41■■□□□ 1.98
SYNGR1-202ENST00000318801 MAGEB10Q96LZ2 347 aaPredicted RBP27.41■■□□□ 1.98
SYNGR1-202ENST00000318801 AICDAQ9GZX7 198 aa27.41■■□□□ 1.98
SYNGR1-202ENST00000318801 KCNK13Q9HB14 408 aa27.41■■□□□ 1.98
SYNGR1-202ENST00000318801 ABI3Q9P2A4 366 aa27.41■■□□□ 1.98
SYNGR1-202ENST00000318801 PSMC3IPQ9P2W1 217 aaPredicted RBP27.41■■□□□ 1.98
SYNGR1-202ENST00000318801 XPR1Q9UBH6 696 aa27.41■■□□□ 1.98
SYNGR1-202ENST00000318801 COPG1Q9Y678 874 aaKnown RBP27.41■■□□□ 1.98
SYNGR1-202ENST00000318801 STX16-NPEPL1H3BU86 382 aa27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 STX16O14662 325 aa27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 EEF1DP29692 281 aaKnown RBP27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 RAB38P57729 211 aa27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 ZNF169Q14929 603 aaPredicted RBP27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 B3GNTL1Q67FW5 361 aaPredicted RBP27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 GOLGA7Q7Z5G4 137 aa27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 SHISA5Q8N114 240 aa27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 SUN3Q8TAQ9 357 aa27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 HAS2Q92819 552 aa27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 ZNF354BQ96LW1 612 aa27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 MS4A8Q9BY19 250 aa27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 MMP25Q9NPA2 562 aa27.4■■□□□ 1.98
SYNGR1-202ENST00000318801 C4orf51C9J302 202 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 FAM227AF5H4B4 570 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 TGFB1P01137 390 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 TAC1P20366 129 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 SOX11P35716 441 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 HSD17B7P56937 341 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 BTG2P78543 158 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 ZNF33BQ06732 778 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 SLC13A2Q13183 592 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 DDX39BQ13838 428 aaKnown RBP27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 RUNX2Q13950 521 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 ZNF595Q8IYB9 648 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 CISD2Q8N5K1 135 aaKnown RBP27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 QRFPRQ96P65 431 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 TXLNGYQ9BZA5 131 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 AGPAT4Q9NRZ5 378 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 TSC22D4Q9Y3Q8 395 aa27.39■■□□□ 1.98
SYNGR1-202ENST00000318801 E2F3O00716 465 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 SIX3O95343 332 aaPredicted RBP27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 CLDN9O95484 217 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 CELA2AP08217 269 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 MAOAP21397 527 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 PTX3P26022 381 aaPredicted RBP27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 CCNG1P51959 295 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 RAP1GDS1P52306 607 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 KHDRBS2Q5VWX1 349 aaKnown RBP27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 ADNP2Q6IQ32 1131 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 CUZD1Q86UP6 607 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 SLC5A8Q8N695 610 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 LRRN4CLQ8ND94 238 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 C7orf57Q8NEG2 295 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 HUS1BQ8NHY5 278 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 ACMSDQ8TDX5 336 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 UBLCP1Q8WVY7 318 aaPredicted RBP27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 RGMAQ96B86 450 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 PPCSQ9HAB8 311 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 PRDM7Q9NQW5 492 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 PRTFDC1Q9NRG1 225 aa27.38■■□□□ 1.97
SYNGR1-202ENST00000318801 H0YIV9 168 aa27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 TSFMP43897 325 aaKnown RBP27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 CPSF6Q16630 551 aaKnown RBP eCLIP27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 DEPDC1Q5TB30 811 aa27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 OR1N1Q8NGS0 311 aa27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 SNRNP40Q96DI7 357 aaKnown RBP27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 RNF32Q9H0A6 362 aa27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 NOL11Q9H8H0 719 aaKnown RBP27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 LYRM4Q9HD34 91 aa27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 DAPP1Q9UN19 280 aa27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 PCDHGA10Q9Y5H3 936 aa27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 FLNCQ14315 2725 aa27.37■■□□□ 1.97
SYNGR1-202ENST00000318801 TRAV17A0A0B4J275 112 aa27.36■■□□□ 1.97
SYNGR1-202ENST00000318801 TCRBV16S1A1N1A0A5B0 115 aa27.36■■□□□ 1.97
SYNGR1-202ENST00000318801 BLACEA4D250 179 aa27.36■■□□□ 1.97
SYNGR1-202ENST00000318801 TBX6O95947 436 aaPredicted RBP27.36■■□□□ 1.97
SYNGR1-202ENST00000318801 CERS1P27544 350 aa27.36■■□□□ 1.97
SYNGR1-202ENST00000318801 TNFRSF8P28908 595 aa27.36■■□□□ 1.97
SYNGR1-202ENST00000318801 SSR2P43308 183 aa27.36■■□□□ 1.97
SYNGR1-202ENST00000318801 LIM2P55344 173 aa27.36■■□□□ 1.97
SYNGR1-202ENST00000318801 MTERF1Q99551 399 aaKnown RBP27.36■■□□□ 1.97
SYNGR1-202ENST00000318801 LRRC14BA6NHZ5 514 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 GCAP28676 217 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 ARFIP1P53367 373 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 SLC26A5P58743 744 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 MEP1AQ16819 746 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 C10orf62Q5T681 223 aaPredicted RBP27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 TTC19Q6DKK2 380 aaPredicted RBP27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 H3F3CQ6NXT2 135 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 GSPT2Q8IYD1 628 aaKnown RBP27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 ACOT4Q8N9L9 421 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 L3MBTL4Q8NA19 623 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 PLA2G3Q9NZ20 509 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 TBK1Q9UHD2 729 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 IGKV3D-11A0A0A0MRZ8 115 aa27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 HIST1H1TP22492 207 aaPredicted RBP27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 ATP5A1P25705 553 aaKnown RBP27.35■■□□□ 1.97
SYNGR1-202ENST00000318801 TNFSF10P50591 281 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms