RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SPNP16150 400 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TMBIM6P55061 237 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 MVKQ03426 396 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 HTR4Q13639 388 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 MLF2Q15773 248 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 UGT8Q16880 541 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TMEM52BQ4KMG9 183 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF776Q68DI1 518 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TTC23LQ6PF05 361 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 AHSA2Q719I0 299 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 CEP68Q76N32 757 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 LINC01555Q8NAE3 123 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 SMRP1Q8NCR6 262 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 FAM83FQ8NEG4 500 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 OR4E2Q8NGC2 313 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 NETO1Q8TDF5 533 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 CAPSLQ8WWF8 208 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 RNF31Q96EP0 1072 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 OTUB1Q96FW1 271 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 F2RL3Q96RI0 385 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TPSD1Q9BZJ3 242 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ZBTB20Q9HC78 741 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 SERHLQ9NQF3 203 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 CCDC177Q9NQR7 707 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 MTCH2Q9Y6C9 303 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF701M0R085 212 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 PRAMEF10O60809 474 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ANGPTL1O95841 491 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 DLGAP3O95886 979 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 MT-ND2P03891 347 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 CEACAM5P06731 702 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 RAP2AP10114 183 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF24P17028 368 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 NDUFV2P19404 249 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 IGFALSP35858 605 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 NUDT6P53370 316 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 RAE1P78406 368 aaKnown RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 SP140Q13342 867 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 PWP1Q13610 501 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 OXA1LQ15070 435 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 AASDHQ4L235 1098 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF658BQ4V348 819 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 MED27Q6P2C8 311 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 VTCN1Q7Z7D3 282 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 HMGN2P46Q86SG4 172 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 PTRH1Q86Y79 214 aaKnown RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 AMER3Q8N944 861 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TMEM145Q8NBT3 493 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 OR56A3Q8NH54 315 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 STON2Q8WXE9 905 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ROGDIQ9GZN7 287 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 RAD18Q9NS91 495 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 RAPGEFL1Q9UHV5 662 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ENPP5Q9UJA9 477 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ABCG2Q9UNQ0 655 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 FAM32AQ9Y421 112 aaKnown RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 SNX8Q9Y5X2 465 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ASPMQ8IZT6 3477 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 LOC100506127A0A0U1RQW1 187 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 KPNA4O00629 521 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 BCKDKO14874 412 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 OR1F1O43749 312 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 LCMT2O60294 686 aaKnown RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ALPPL2P10696 532 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 DBTP11182 482 aaKnown RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 GSTM2P28161 218 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 HTR1EP28566 365 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TTKP33981 857 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 DCTP40126 519 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 KIR3DL1P43629 444 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 EEFSECP57772 596 aaKnown RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TAS2R50P59544 299 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 RPS26P62854 115 aaKnown RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 RPS21P63220 83 aaKnown RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 DMPKQ09013 629 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 GRSF1Q12849 480 aaKnown RBP eCLIP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 METRNLQ641Q3 311 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ZCCHC8Q6NZY4 707 aaKnown RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TMEM184AQ6ZMB5 413 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF852Q6ZMS4 543 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 Q7L0L9 218 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 SZRD1Q7Z422 152 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 COMMD6Q7Z4G1 85 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 CYP4Z1Q86W10 505 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 SLC44A2Q8IWA5 706 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-202ENST00000315962 CACTIN-AS1Q8N1I8 211 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TCAIMQ8N3R3 496 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ANKRD53Q8N9V6 530 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 HCAR2Q8TDS4 363 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 FAR1Q8WVX9 515 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ATL1Q8WXF7 558 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 COX14Q96I36 57 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF347Q96SE7 839 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 C19orf43Q9BQ61 176 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TMEM168Q9H0V1 697 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 LMAN2LQ9H0V9 348 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 OBP2AQ9NY56 170 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 TBC1D29Q9UFV1 150 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 DYRK1BQ9Y463 629 aa7.28□□□□□ -1.24
TRIM55-202ENST00000315962 GRXCR2A6NFK2 248 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms