RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SHROOM3Q8TF72 1996 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 NME4O00746 187 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 FZD6O60353 706 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 H1F0P07305 194 aaKnown RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 CD38P28907 300 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 GPNMBQ14956 572 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 MLF2Q15773 248 aaPredicted RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 AHSA2Q719I0 299 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 PARP8Q8N3A8 854 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 PACRGLQ8N7B6 248 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 C5orf34Q96MH7 638 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 PTCHD1Q96NR3 888 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 C6orf62Q9GZU0 229 aaPredicted RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 BRF2Q9HAW0 419 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 PRTFDC1Q9NRG1 225 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 MCM8Q9UJA3 840 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 ACSL6Q9UKU0 697 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 ENTPD2Q9Y5L3 495 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 GPR45Q9Y5Y3 372 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 CAPN14A8MX76 684 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 RGS10O43665 173 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 RNH1P13489 461 aaKnown RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 ADAMTSL4Q6UY14 1074 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 C6orf120Q7Z4R8 191 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 ZZZ3Q8IYH5 903 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 ATP6V1C2Q8NEY4 427 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 GPR78Q96P69 363 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 ZFYVE21Q9BQ24 234 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 BHLHE41Q9C0J9 482 aaPredicted RBP13.1□□□□□ -0.31
DDX54-202ENST00000314045 DMRT3Q9NQL9 472 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 KLHL1Q9NR64 748 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 TOR4AQ9NXH8 423 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 GSTK1Q9Y2Q3 226 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 TRIP11Q15643 1979 aa13.1□□□□□ -0.31
DDX54-202ENST00000314045 WDR90Q96KV7 1748 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 MYOCOSA0A1B0GUC4 107 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 F3P13726 295 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 FPR1P21462 350 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 IMPA1P29218 277 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 SIM1P81133 766 aaPredicted RBP13.09□□□□□ -0.31
DDX54-202ENST00000314045 RBBP4Q09028 425 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 DEFB110Q30KQ9 67 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 PIGGQ5H8A4 983 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 TMEM164Q5U3C3 297 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 B3GNT6Q6ZMB0 384 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 PAIP1Q9H074 479 aaKnown RBP13.09□□□□□ -0.31
DDX54-202ENST00000314045 RPF2Q9H7B2 306 aaKnown RBP13.09□□□□□ -0.31
DDX54-202ENST00000314045 CD320Q9NPF0 282 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 CFL2Q9Y281 166 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 KIR2DS5A0A0G2JLQ3 304 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 A0A0G2JNG1 304 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 MCIDASD6RGH6 385 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 KIR2DS3K7RE56 304 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 GNB5O14775 395 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 OR2B3O76000 313 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 TAP2Q03519 686 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 HYAL1Q12794 435 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 KIR2DS5Q14953 304 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 DGUOKQ16854 277 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 TMEM150AQ86TG1 271 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 OR4N5Q8IXE1 308 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 EGLN2Q96KS0 407 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 DPH2Q9BQC3 489 aaPredicted RBP13.09□□□□□ -0.31
DDX54-202ENST00000314045 TBL1XR1Q9BZK7 514 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 EPHX3Q9H6B9 360 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 C5AR2Q9P296 337 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 OR12D1P0DN82 309 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 PRKACGP22612 351 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 YPEL5P62699 121 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 CCNIQ14094 377 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 CRB2Q5IJ48 1285 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 FAM180BQ6P0A1 224 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 SPNS2Q8IVW8 549 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 ZCCHC7Q8N3Z6 543 aaKnown RBP13.09□□□□□ -0.31
DDX54-202ENST00000314045 ZNF707Q96C28 371 aaPredicted RBP13.09□□□□□ -0.31
DDX54-202ENST00000314045 EXO5Q9H790 373 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 CCM2LQ9NUG4 571 aaPredicted RBP13.09□□□□□ -0.31
DDX54-202ENST00000314045 ACTR10Q9NZ32 417 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 CABIN1Q9Y6J0 2220 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 K7ESM1 405 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 MTHFD2P13995 350 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 HSD17B1P14061 328 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 PSMB5P28074 263 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 RPS6KA3P51812 740 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 PRDX1Q06830 199 aaKnown RBP13.09□□□□□ -0.31
DDX54-202ENST00000314045 KIR2DS3Q14952 304 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 ZNF423Q2M1K9 1284 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 NDUFAF5Q5TEU4 345 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 NIPAL1Q6NVV3 410 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 RNF175Q8N4F7 328 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 ENDOVQ8N8Q3 282 aaKnown RBP13.09□□□□□ -0.31
DDX54-202ENST00000314045 SLC45A3Q96JT2 553 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 NUAK2Q9H093 628 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 TMEM168Q9H0V1 697 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 AMBNQ9NP70 447 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 C11orf16Q9NQ32 467 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 GIN1Q9NXP7 522 aa13.09□□□□□ -0.31
DDX54-202ENST00000314045 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.09□□□□□ -0.31
DDX54-202ENST00000314045 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms