RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 F5H0A9 414 aaPredicted RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 M0QZQ0 153 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 PMM2O15305 246 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 ARL6IP5O75915 188 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 CER1O95813 267 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 IFNA2P01563 188 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 GNAZP19086 355 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 TCEA1P23193 301 aaKnown RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 FADDQ13158 208 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 NFE2L1Q14494 772 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 PTGR1Q14914 329 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 LRIT3Q3SXY7 679 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 PIGGQ5H8A4 983 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 CERS6Q6ZMG9 384 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 ADGRG6Q86SQ4 1221 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 SBF2Q86WG5 1849 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 MARVELD2Q8N4S9 558 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 GALNT11Q8NCW6 608 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 PEX13Q92968 403 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 EIF2B3Q9NR50 452 aaKnown RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 ERVK13-1Q9NX77 482 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 MS4A12Q9NXJ0 267 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 MYO9BQ13459 2157 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 ADAMTS7Q9UKP4 1686 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 HTR3EA5X5Y0 456 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 PRORSD1PA6NEY8 169 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 EEF1E1O43324 174 aaKnown RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 TLX2O43763 284 aaPredicted RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 FPR1P21462 350 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 AHCYP23526 432 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 CHMP24386 653 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 S100PP25815 95 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 UQCRC1P31930 480 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 CDKN2CP42773 168 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 SUOXP51687 545 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 RASGEF1BQ0VAM2 473 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 LAPTM4AQ15012 233 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 EIPR1Q53HC9 387 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 LRRC66Q68CR7 880 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 CLEC20AQ6ZU45 233 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 UBQLNLQ8IYU4 475 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 CNIH3Q8TBE1 160 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 BRSK1Q8TDC3 778 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 FCAMRQ8WWV6 532 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 RHBDF1Q96CC6 855 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 ITPKCQ96DU7 683 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 LRIG1Q96JA1 1093 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 DPEP3Q9H4B8 488 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 SLA2Q9H6Q3 261 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 THUMPD1Q9NXG2 353 aaKnown RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 FAM53CQ9NYF3 392 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 MGAT4CQ9UBM8 478 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 KCNN3Q9UGI6 736 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 IL36AQ9UHA7 158 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 CYP8B1Q9UNU6 501 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 ERVK-19Q9WJR5 959 aa7.9□□□□□ -1.14
VPS41-202ENST00000310301 TIMM8BQ9Y5J9 83 aaPredicted RBP7.9□□□□□ -1.14
VPS41-202ENST00000310301 KLF11O14901 512 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 SNAP29O95721 258 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 SRPRAP08240 638 aaKnown RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 PCSK2P16519 638 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 HOXA11P31270 313 aaPredicted RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 CRISP3P54108 245 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 LMAN2Q12907 356 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 MAD2L1BPQ15013 274 aaPredicted RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 DHCR24Q15392 516 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 SLC35G1Q2M3R5 365 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 DPY19L1Q2PZI1 675 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 ASTE1Q2TB18 679 aaPredicted RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 ATXN7L2Q5T6C5 722 aaPredicted RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 LHFPL3Q86UP9 236 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 TAC4Q86UU9 113 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 Q8N402 240 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 SLC15A4Q8N697 577 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 OR2AJ1Q8NGZ0 328 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 DDX1Q92499 740 aaKnown RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 ADAD1Q96M93 576 aaKnown RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 SLC35A5Q9BS91 424 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 ARL6Q9H0F7 186 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 DNAJC27Q9NZQ0 273 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 SEC14L4Q9UDX3 406 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 CPED1A4D0V7 1026 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 OR1F1O43749 312 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 CH25HO95992 272 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 H1F0P07305 194 aaKnown RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 F7P08709 466 aaPredicted RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 GLULP15104 373 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 MYOGP15173 224 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 UFM1P61960 85 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 NFKB2Q00653 900 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 DCAF12L1Q5VU92 463 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 BRAT1Q6PJG6 821 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 ARSKQ6UWY0 536 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 SERPINA9Q86WD7 417 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 PDZD9Q8IXQ8 264 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 YIPF7Q8N8F6 280 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 CMASQ8NFW8 434 aaPredicted RBP7.9□□□□□ -1.15
VPS41-202ENST00000310301 TM9SF2Q99805 663 aa7.9□□□□□ -1.15
VPS41-202ENST00000310301 IER2Q9BTL4 223 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms