RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 PM20D1Q6GTS8 502 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 WDR53Q7Z5U6 358 aaPredicted RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 PTRH1Q86Y79 214 aaKnown RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 DENND1CQ8IV53 801 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 HIST1H2AAQ96QV6 131 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 CERS4Q9HA82 394 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 A0A0G2JPF8 293 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 HNRNPCL3B7ZW38 293 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 CHRNA1P02708 482 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 HNRNPCL4P0DMR1 293 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 CSNK2A2P19784 350 aaPredicted RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 RAB5CP51148 216 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 DAOAP59103 153 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 TBCEQ15813 527 aaPredicted RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 PTPN20Q4JDL3 420 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 GAREM2Q75VX8 874 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ASRGL1Q7L266 308 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 SLC29A4Q7RTT9 530 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 GSTCDQ8NEC7 633 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 OR8K5Q8NH50 307 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ISL2Q96A47 359 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 PKP4Q99569 1192 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 GPR160Q9UJ42 338 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 S1PR4O95977 384 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 PNCKQ6P2M8 343 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 NIPAL3Q6P499 406 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 DPPA2Q7Z7J5 298 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 SIMC1Q8NDZ2 872 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ZNF563Q8TA94 476 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 IPPKQ9H8X2 491 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 SERTAD3Q9UJW9 196 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 KIF26BQ2KJY2 2108 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 FARS2O95363 451 aaKnown RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 OR3A3P47888 321 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 OR3A2P47893 321 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ZNF628Q5EBL2 1059 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 HES5Q5TA89 166 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 TPRG1Q6ZUI0 275 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 CREB3L2Q70SY1 520 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 DET1Q7L5Y6 550 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 TEX26Q8N6G2 289 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 OR52K1Q8NGK4 314 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 UBA3Q8TBC4 463 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 TBC1D15Q8TC07 691 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 P2RX7Q99572 595 aaKnown RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 SEPHS2Q99611 448 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 RSPH9Q9H1X1 276 aaPredicted RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 MOB1AQ9H8S9 216 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 SLC24A3Q9HC58 644 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 OLAHQ9NV23 265 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 IL37Q9NZH6 218 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ABCD2Q9UBJ2 740 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 SULT1C2O00338 296 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 TP53I11O14683 189 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 HTRA2O43464 458 aaPredicted RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 IFI6P09912 130 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 CPOXP36551 454 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 GRB14Q14449 540 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 KIR2DS3Q14952 304 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 MBLAC2Q68D91 279 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ASCC1Q8N9N2 400 aaKnown RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 MVB12AQ96EY5 273 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 NPY6RQ99463 290 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 SMDT1Q9H4I9 107 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ZFP14Q9HCL3 533 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 A0A0U1RQJ8 604 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 DISC1C4P0D8 188 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 GTF2F2P13984 249 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 AKT2P31751 481 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 SOX11P35716 441 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ARPP19P56211 112 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 CRB2Q5IJ48 1285 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 KIAA1324Q6UXG2 1013 aaKnown RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 KSR1Q8IVT5 923 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 NXPE1Q8N323 547 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 HDDC3Q8N4P3 179 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 OR56B4Q8NH76 319 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 RGS17Q9UGC6 210 aaPredicted RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 CLIC1O00299 241 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 AQP6Q13520 282 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ENPP2Q13822 863 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 PPP1R26Q5T8A7 1209 aaPredicted RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 COX18Q8N8Q8 333 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ATP6V1C2Q8NEY4 427 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ADAMTS19Q8TE59 1207 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ALG3Q92685 438 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 ZBTB10Q96DT7 871 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 LMF2Q9BU23 707 aaKnown RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 ELOVL2Q9NXB9 296 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 PCDH8O95206 1070 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 PROS1P07225 676 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 GM2AP17900 193 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 PCGF2P35227 344 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 RAB5BP61020 215 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 FUT11Q495W5 492 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.88□□□□□ -1.79
USH2A-201ENST00000307340 OR5L1Q8NGL2 311 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 FBXO30Q8TB52 745 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 TWNKQ96RR1 684 aa3.88□□□□□ -1.79
USH2A-201ENST00000307340 CHRDL1Q9BU40 450 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms