RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 DEPDC1Q5TB30 811 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 NUP210LQ5VU65 1888 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 ZNF385CQ66K41 422 aaPredicted RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 NIPAL1Q6NVV3 410 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 PRMT9Q6P2P2 845 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 DTWD1Q8N5C7 304 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 CPSF7Q8N684 471 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 OR2L5Q8NG80 312 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 F2RL3Q96RI0 385 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 DPH2Q9BQC3 489 aaPredicted RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 MRPL1Q9BYD6 325 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 ZNF385DQ9H6B1 395 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 NOP53Q9NZM5 478 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 DKK4Q9UBT3 224 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 CDC14AQ9UNH5 594 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 EIF3LQ9Y262 564 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 POLR3HQ9Y535 204 aaPredicted RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 COPG1Q9Y678 874 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 CEP295Q9C0D2 2601 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 A0A0A6YYC8 382 aaPredicted RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 C4orf51C9J302 202 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 I3L1I5 382 aaPredicted RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 SAP18O00422 153 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 EBAG9O00559 213 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 SEMA3DO95025 777 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 NSA2O95478 260 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 IDO1P14902 403 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 RAP1GDS1P52306 607 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 DIO3P55073 304 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 RAB8AP61006 207 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 IRX1P78414 480 aaPredicted RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 DCDP81605 110 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 ACSM2AQ08AH3 577 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 GSTA3Q16772 222 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 TMEM35AQ53FP2 167 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 IL23RQ5VWK5 629 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 ACSM2BQ68CK6 577 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 C6orf89Q6UWU4 347 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 PRSS41Q7RTY9 318 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 TIPARPQ7Z3E1 657 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 CLNKQ7Z7G1 428 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 PARP9Q8IXQ6 854 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 SRFBP1Q8NEF9 429 aaKnown RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 CHTF18Q8WVB6 975 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 MR1Q95460 341 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 MMABQ96EY8 250 aaPredicted RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 TMEM121BQ9BXQ6 578 aaPredicted RBP19.61■□□□□ 0.73
RTCA-201ENST00000260563 LHX9Q9NQ69 397 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 MRGBPQ9NV56 204 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 AIG1Q9NVV5 245 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 ASIC5Q9NY37 505 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 AHSPQ9NZD4 102 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 ARMCX1Q9P291 453 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 NAALAD2Q9Y3Q0 740 aa19.61■□□□□ 0.73
RTCA-201ENST00000260563 CCDC88CQ9P219 2028 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 A0A088AWK7 358 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 CCT8L1PA6NM43 557 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 FOXS1O43638 330 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 ZNF10P21506 573 aaPredicted RBP19.6■□□□□ 0.73
RTCA-201ENST00000260563 MAPK1P28482 360 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 ATP4BP51164 291 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 PLA2G16P53816 162 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 SNRPNP63162 240 aaKnown RBP19.6■□□□□ 0.73
RTCA-201ENST00000260563 SQLEQ14534 574 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 DEFB134Q4QY38 66 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 ARHGAP40Q5TG30 622 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 METTL4Q8N3J2 472 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 C1orf52Q8N6N3 182 aaKnown RBP19.6■□□□□ 0.73
RTCA-201ENST00000260563 OR9A4Q8NGU2 314 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 FGF11Q92914 225 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 C11orf24Q96F05 449 aaPredicted RBP19.6■□□□□ 0.73
RTCA-201ENST00000260563 FCRL1Q96LA6 429 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 KCNC2Q96PR1 638 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 C17orf62Q9BQA9 187 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 CCDC106Q9BWC9 280 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 COPS7BQ9H9Q2 264 aaPredicted RBP19.6■□□□□ 0.73
RTCA-201ENST00000260563 ZNF304Q9HCX3 659 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 SIRT5Q9NXA8 310 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 PADI1Q9ULC6 663 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 MAU2Q9Y6X3 613 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 FREM2Q5SZK8 3169 aa19.6■□□□□ 0.73
RTCA-201ENST00000260563 AHCTF1Q8WYP5 2266 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 A0A0G2JN53 185 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 H0YIG0 161 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 GALR3O60755 368 aaPredicted RBP19.59■□□□□ 0.73
RTCA-201ENST00000260563 MYO1DO94832 1006 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 KLHL18O94889 574 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 ATXN8OSP0DMR3 200 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 SMIM10L1P0DMW3 83 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 PIM1P11309 404 aaPredicted RBP19.59■□□□□ 0.73
RTCA-201ENST00000260563 ACPPP15309 386 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 FBLP22087 321 aaKnown RBP19.59■□□□□ 0.73
RTCA-201ENST00000260563 OR1D4P47884 311 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 STX1BP61266 288 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 NOXRED1Q6NXP6 359 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 ABHD17CQ6PCB6 329 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 DTX1Q86Y01 620 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 PDSS2Q86YH6 399 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 COL26A1Q96A83 441 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 SMIM10Q96HG1 83 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms