RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 EFR3AQ14156 821 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 LRRC32Q14392 662 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 KCTD11Q693B1 232 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 IL20RBQ6UXL0 311 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 ALKAL1Q6UXT8 129 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 ARHGAP39Q9C0H5 1083 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 DCAF13Q9NV06 445 aaKnown RBP14.29□□□□□ -0.12
KCTD3-201ENST00000259154 PFDN2Q9UHV9 154 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 CDH7Q9ULB5 785 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 POFUT2Q9Y2G5 429 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 LOC100509620A0A075B734 347 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 YBEYP58557 167 aaPredicted RBP14.29□□□□□ -0.12
KCTD3-201ENST00000259154 PRSS55Q6UWB4 352 aaPredicted RBP14.29□□□□□ -0.12
KCTD3-201ENST00000259154 CEACAM20Q6UY09 585 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 OR10T2Q8NGX3 314 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 KCTD13Q8WZ19 329 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 KCTD5Q9NXV2 234 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 GABRQQ9UN88 632 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 DHRS7Q9Y394 339 aa14.29□□□□□ -0.12
KCTD3-201ENST00000259154 CENPBD1B2RD01 187 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 GFRA2O00451 464 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 GABARAPO95166 117 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 HPRP00739 348 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 MRPL3P09001 348 aaKnown RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 SAGP10523 405 aaPredicted RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 PIK3CBP42338 1070 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 CCR4P51679 360 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 GABARAPL2P60520 117 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 VARS2Q5ST30 1063 aaKnown RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 CFAP206Q8IYR0 622 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 MKRN2Q9H000 416 aaKnown RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 RNF121Q9H920 327 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 STX11O75558 287 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 KCNE1P15382 129 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 ENDOUP21128 410 aaKnown RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 SRSF11Q05519 484 aaKnown RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 GPR68Q15743 365 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 ZNF791Q3KP31 576 aaPredicted RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 C9orf64Q5T6V5 341 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 ANXA8L1Q5VT79 327 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 SFRP4Q6FHJ7 346 aaPredicted RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 GGHQ92820 318 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 TREX1Q9NSU2 369 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 RPL36Q9Y3U8 105 aaKnown RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 A0A1W2PRB8 838 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 TNFRSF10AO00220 468 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 FAM163BP0C2L3 166 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 ZNF806P0C7X5 589 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 BMP7P18075 431 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 ATF6P18850 670 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 KCNC4Q03721 635 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 GRSF1Q12849 480 aaKnown RBP eCLIP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 GINS1Q14691 196 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 PROX2Q3B8N5 592 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 LRRC37A5PQ49AS3 106 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 CPZQ66K79 652 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 SHQ1Q6PI26 577 aaKnown RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 ZNF655Q8N720 491 aaPredicted RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 NEIL3Q8TAT5 605 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 ASB15Q8WXK1 588 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 SCAMP4Q969E2 229 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 REPS1Q96D71 796 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 UBXN10Q96LJ8 280 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 WRAP53Q9BUR4 548 aaKnown RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 TMEM121BQ9BXQ6 578 aaPredicted RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 MRPL9Q9BYD2 267 aaKnown RBP14.28□□□□□ -0.12
KCTD3-201ENST00000259154 ALOXE3Q9BYJ1 711 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 HCN3Q9P1Z3 774 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 MLXQ9UH92 298 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 PCDHB1Q9Y5F3 818 aa14.28□□□□□ -0.12
KCTD3-201ENST00000259154 CEP290O15078 2479 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 A0A1B0GW55 424 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 RTCAO00442 366 aaKnown RBP14.27□□□□□ -0.12
KCTD3-201ENST00000259154 ACSL4O60488 711 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 GATBO75879 557 aaKnown RBP14.27□□□□□ -0.12
KCTD3-201ENST00000259154 FGF4P08620 206 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 DUX4L2P0CJ85 424 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 DUX4L3P0CJ86 424 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 DUX4L4P0CJ87 422 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 DUX4L5P0CJ88 424 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 DUX4L6P0CJ89 424 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 DUX4L7P0CJ90 424 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 CYP2A6P11509 494 aaPredicted RBP14.27□□□□□ -0.12
KCTD3-201ENST00000259154 DNASE1P24855 282 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 TGFBR2P37173 567 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 ARHGDIBP52566 201 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 ST8SIA6P61647 398 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 POU6F2P78424 691 aaPredicted RBP14.27□□□□□ -0.12
KCTD3-201ENST00000259154 NKG7Q16617 165 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 FBXO43Q4G163 708 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 SMUG1Q53HV7 270 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 OR2G6Q5TZ20 316 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 FAM205BPQ63HN1 556 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 GTF2IRD2BQ6EKJ0 949 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 GTF2IRD2Q86UP8 949 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 RHEBL1Q8TAI7 183 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 TANKQ92844 425 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 FUZQ9BT04 418 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 CD244Q9BZW8 370 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms