RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 NNMTP40261 264 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 TMED10P49755 219 aaKnown RBP14.58□□□□□ -0.08
DDX56-201ENST00000258772 RGS6P49758 472 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 LIMK1P53667 647 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 PCBP3P57721 371 aaKnown RBP14.58□□□□□ -0.08
DDX56-201ENST00000258772 CDC20Q12834 499 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 IRF3Q14653 427 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 GRIN2CQ14957 1233 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 HIST2H2AA3Q6FI13 130 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 KIAA0907Q7Z7F0 614 aaPredicted RBP14.58□□□□□ -0.08
DDX56-201ENST00000258772 ZNF557Q8N988 423 aaPredicted RBP14.58□□□□□ -0.08
DDX56-201ENST00000258772 HPS1Q92902 700 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 CRELD1Q96HD1 420 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 SGPP1Q9BX95 441 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 TMEM121BQ9BXQ6 578 aaPredicted RBP14.58□□□□□ -0.08
DDX56-201ENST00000258772 RNF167Q9H6Y7 350 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 SP140LQ9H930 580 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 MYNNQ9NPC7 610 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 SACM1LQ9NTJ5 587 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 ZNF229Q9UJW7 825 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 SLC6A14Q9UN76 642 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 UGT2A1Q9Y4X1 527 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 PCDHGA3Q9Y5H0 932 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 SAGE2PA6NJ88 616 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 M0R129 80 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 KLK1P06870 262 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 ARAFP10398 606 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 CRISP3P54108 245 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 MEF2AQ02078 507 aaPredicted RBP14.58□□□□□ -0.08
DDX56-201ENST00000258772 SLC13A2Q13183 592 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 PTGES3Q15185 160 aaKnown RBP14.58□□□□□ -0.08
DDX56-201ENST00000258772 ZNF181Q2M3W8 571 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 SOWAHCQ53LP3 525 aaPredicted RBP14.58□□□□□ -0.08
DDX56-201ENST00000258772 SLC39A5Q6ZMH5 540 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 METTL4Q8N3J2 472 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 GTPBP3Q969Y2 492 aaKnown RBP14.58□□□□□ -0.08
DDX56-201ENST00000258772 DEFB118Q96PH6 123 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 FAM129BQ96TA1 746 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 EPHX3Q9H6B9 360 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 DKK3Q9UBP4 350 aa14.58□□□□□ -0.08
DDX56-201ENST00000258772 FAM32AQ9Y421 112 aaKnown RBP14.58□□□□□ -0.08
DDX56-201ENST00000258772 A0A1W2PRB8 838 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 TBX1O43435 398 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 FGF18O76093 207 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 GADD45GO95257 159 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 CYP4F2P78329 520 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 TAP2Q03519 686 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 TPRG1LQ5T0D9 272 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 B3GNT7Q8NFL0 401 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 KBTBD8Q8NFY9 601 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 OR9A1PQ8NGU1 263 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 MTERF3Q96E29 417 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 CAPNS2Q96L46 248 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 WRAP53Q9BUR4 548 aaKnown RBP14.57□□□□□ -0.08
DDX56-201ENST00000258772 SPNS1Q9H2V7 528 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 CPNE5Q9HCH3 593 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 TDP1Q9NUW8 608 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 ANKMY1Q9P2S6 941 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 RAB23Q9ULC3 237 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 ITM2BQ9Y287 266 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 ENPP4Q9Y6X5 453 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 CARNS1A5YM72 827 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 CCNB2O95067 398 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 KRT75O95678 551 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 CBLP22681 906 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 SERPINB1P30740 379 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 PPM1AP35813 382 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 CDC42P60953 191 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 OLR1P78380 273 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 GANABQ14697 944 aaKnown RBP14.57□□□□□ -0.08
DDX56-201ENST00000258772 TEAD2Q15562 447 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 TRIM60Q495X7 471 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 STEAP3Q658P3 488 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 LRRC56Q8IYG6 542 aaPredicted RBP14.57□□□□□ -0.08
DDX56-201ENST00000258772 NRSN1Q8IZ57 195 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 SLC5A11Q8WWX8 675 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 CENPOQ9BU64 300 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 SLC6A16Q9GZN6 736 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 CCDC59Q9P031 241 aaKnown RBP14.57□□□□□ -0.08
DDX56-201ENST00000258772 WDR37Q9Y2I8 494 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 IFT52Q9Y366 437 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 KLK4Q9Y5K2 254 aa14.57□□□□□ -0.08
DDX56-201ENST00000258772 CFAP20Q9Y6A4 193 aaKnown RBP14.57□□□□□ -0.08
DDX56-201ENST00000258772 PLXND1Q9Y4D7 1925 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 LRRK1Q38SD2 2015 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 ABHD14A-ACY1A0A1B0GW23 586 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 TRBC2A0A5B9 178 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 TRIM43BA6NCK2 446 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 LILRB5O75023 590 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 CXCL14O95715 111 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 RECKO95980 971 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 HSMCR30P0CW71 290 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 RHCEP18577 417 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 MAGEA10P43363 369 aaPredicted RBP14.56□□□□□ -0.08
DDX56-201ENST00000258772 FOXD4Q12950 439 aaPredicted RBP14.56□□□□□ -0.08
DDX56-201ENST00000258772 NXPE4Q6UWF7 544 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 UNC5DQ6UXZ4 953 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 ZNF366Q8N895 744 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 LRIG1Q96JA1 1093 aa14.56□□□□□ -0.08
DDX56-201ENST00000258772 MAPKAP1Q9BPZ7 522 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms