RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MAN1A2O60476 641 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 CDH16O75309 829 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 EEDO75530 441 aaKnown RBP12.9□□□□□ -0.34
VEGFA-201ENST00000230480 HEXBP07686 556 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ACPPP15309 386 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 CHN1P15882 459 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 MAOAP21397 527 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ATP5F1P24539 256 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-201ENST00000230480 PPP2R1BP30154 601 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 SOX11P35716 441 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 PIK3CBP42338 1070 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 LIM2P55344 173 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 HERVK_113P63132 956 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 CLCQ05315 142 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ZNF844Q08AG5 666 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ZSCAN26Q16670 478 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 TUBB8Q3ZCM7 444 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 GGTA1PQ4G0N0 100 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 NADK2Q4G0N4 442 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 CRB2Q5IJ48 1285 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 KHDRBS2Q5VWX1 349 aaKnown RBP12.9□□□□□ -0.34
VEGFA-201ENST00000230480 CES4AQ5XG92 561 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 MRM1Q6IN84 353 aaKnown RBP12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ZYG11AQ6WRX3 759 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ASB18Q6ZVZ8 466 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ABHD13Q7L211 337 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 NDUFAF7Q7L592 441 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 NFAM1Q8NET5 270 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-201ENST00000230480 TRPC4APQ8TEL6 797 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ZBTB9Q96C00 473 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 FER1L6-AS2Q96M78 137 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 OR1F2PQ96R84 312 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 MAPKAP1Q9BPZ7 522 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 CCDC77Q9BR77 488 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ERVK-6Q9BXR3 956 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ACTR8Q9H981 624 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 PPCSQ9HAB8 311 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 CLK4Q9HAZ1 481 aaKnown RBP12.9□□□□□ -0.34
VEGFA-201ENST00000230480 ATP13A2Q9NQ11 1180 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 TMCO1Q9UM00 188 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 DAPP1Q9UN19 280 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 PLAAQ9Y263 795 aa12.9□□□□□ -0.34
VEGFA-201ENST00000230480 CROCCQ5TZA2 2017 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 SVILO95425 2214 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 UBR5O95071 2799 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-201ENST00000230480 TCRBV16S1A1N1A0A5B0 115 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 TLDC2A0PJX2 215 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 MKRN2OSH3BPM6 223 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 PYCARD-AS1I3L0S3 204 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 FOXE1O00358 373 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-201ENST00000230480 PEX12O00623 359 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 TMPRSS11DO60235 418 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 B4GALT2O60909 372 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 SMIM24O75264 130 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 OR4F21O95013 312 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 CLDN9O95484 217 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 C8orf89P0DMQ9 161 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 ITGAMP11215 1152 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 PCNAP12004 261 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 KRT4P19013 534 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 IL10P22301 178 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 ARRB2P32121 409 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 HTR6P50406 440 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 GPR143P51810 404 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 FOXA1P55317 472 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 STXBP1P61764 594 aaKnown RBP12.89□□□□□ -0.35
VEGFA-201ENST00000230480 AIMP2Q13155 320 aaKnown RBP12.89□□□□□ -0.35
VEGFA-201ENST00000230480 LACTB2Q53H82 288 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-201ENST00000230480 PAGE2BQ5JRK9 111 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 IGFL3Q6UXB1 125 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 CPEB2Q7Z5Q1 589 aaKnown RBP12.89□□□□□ -0.35
VEGFA-201ENST00000230480 TBC1D19Q8N5T2 526 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 ACOT4Q8N9L9 421 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 CCT6BQ92526 530 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 MTFMTQ96DP5 389 aaKnown RBP12.89□□□□□ -0.35
VEGFA-201ENST00000230480 NPLQ9BXD5 320 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-201ENST00000230480 MKS1Q9NXB0 559 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 SLC17A7Q9P2U7 560 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 PPT2Q9UMR5 302 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 ASB4Q9Y574 426 aa12.89□□□□□ -0.35
VEGFA-201ENST00000230480 POLEQ07864 2286 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 USP9XQ93008 2570 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 RELNP78509 3460 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 HIVEP3Q5T1R4 2406 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 A0A0A6YYD5 115 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 TYROBPO43914 113 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 GLRA3O75311 464 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 PRKRAO75569 313 aaKnown RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 SEC24DO94855 1032 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 SORBS2O94875 1100 aaKnown RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 CYC1P08574 325 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 PRR35P0CG20 571 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 SFTPCP11686 197 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 RNH1P13489 461 aaKnown RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 PLA2G2AP14555 144 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 HIST1H1TP22492 207 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-201ENST00000230480 RRADP55042 308 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 MTTPP55157 894 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 RAB38P57729 211 aa12.88□□□□□ -0.35
VEGFA-201ENST00000230480 TBL3Q12788 808 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms