RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 ERVH48-1M5A8F1 160 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 PSMD12O00232 456 aaPredicted RBP13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 FOXE1O00358 373 aaPredicted RBP13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 UBFD1O14562 309 aaKnown RBP13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 TRIM13O60858 407 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 B4GALT2O60909 372 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 ETHE1O95571 254 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 IGHEP01854 428 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 FHP07954 510 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 RNH1P13489 461 aaKnown RBP13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 SSR2P43308 183 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 EFNA3P52797 238 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 MTTPP55157 894 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 PKNOX1P55347 436 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 POLE2P56282 527 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 RUNX2Q13950 521 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 ZSCAN26Q16670 478 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 AP5B1Q2VPB7 878 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 ZNF793Q6ZN11 406 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 SRFBP1Q8NEF9 429 aaKnown RBP13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 METTL6Q8TCB7 284 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 AGAP11Q8TF27 550 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 SELENOMQ8WWX9 145 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 RGMAQ96B86 450 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 C8orf44Q96CB5 159 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 IP6K3Q96PC2 410 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 KCNA7Q96RP8 456 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 SERINC2Q96SA4 455 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 HBEGFQ99075 208 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 TBCDQ9BTW9 1192 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 FBXL4Q9UKA2 621 aa13.86□□□□□ -0.19
PCOLCE-201ENST00000223061 ERICH4A6NGS2 130 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 MASP2O00187 686 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 MANBAO00462 879 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 SOCS6O14544 535 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 ALOX12BO75342 701 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 DNAJB5O75953 348 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 ESRRBO95718 433 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 PDYNP01213 254 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 NR1D1P20393 614 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 HMOX2P30519 316 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 ASPHQ12797 758 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 KIRREL2Q6UWL6 708 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 ACOT4Q8N9L9 421 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 OR1F2PQ96R84 312 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 UBL7Q96S82 380 aaPredicted RBP13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 GATA5Q9BWX5 397 aaPredicted RBP13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 TRIM55Q9BYV6 548 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 SLC29A3Q9BZD2 475 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 ROGDIQ9GZN7 287 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 ING2Q9H160 280 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 CLK4Q9HAZ1 481 aaKnown RBP13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 SSU72Q9NP77 194 aaKnown RBP13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 LANCL2Q9NS86 450 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 TIMM22Q9Y584 194 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 ACTL7BQ9Y614 415 aa13.85□□□□□ -0.19
PCOLCE-201ENST00000223061 PLPP1O14494 284 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 CRCPO75575 148 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 KRT6AP02538 564 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 KRT6BP04259 564 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 ENO1P06733 434 aaKnown RBP13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 C8orf89P0DMQ9 161 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 ACPPP15309 386 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 IL10P22301 178 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 HIST1H1TP22492 207 aaPredicted RBP13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 ATP5A1P25705 553 aaKnown RBP13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 ETV4P43268 484 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 KRT6CP48668 564 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 NAA20P61599 178 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 EEF1A2Q05639 463 aaKnown RBP13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 CUL3Q13618 768 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 C10orf62Q5T681 223 aaPredicted RBP13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 OR4C11Q6IEV9 310 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 PCSK4Q6UW60 755 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 ZCCHC23Q6ZST2 131 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 FAM47BQ8NA70 645 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 METTL21AQ8WXB1 218 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 SERPINI1Q99574 410 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 NPLQ9BXD5 320 aaPredicted RBP13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 SLC12A4Q9UP95 1085 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 ATMQ13315 3056 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 WDR91A4D1P6 747 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 BPGMP07738 259 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 JAK1P23458 1154 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 SERPINB4P48594 390 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 HTR6P50406 440 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 CCL11P51671 97 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 FOXA1P55317 472 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 LIM2P55344 173 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 MAGOHP61326 146 aaKnown RBP13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 RHAGQ02094 409 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 MPP2Q14168 576 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 LY6DQ14210 128 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 ABRAXAS2Q15018 415 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 DCAF10Q5QP82 559 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 LANCL3Q6ZV70 420 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 MED25Q71SY5 747 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 TMEM102Q8N9M5 508 aaPredicted RBP13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 OR11G2Q8NGC1 345 aa13.84□□□□□ -0.19
PCOLCE-201ENST00000223061 SREK1Q8WXA9 508 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms