RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 FAM92BQ6ZTR7 304 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 PIM3Q86V86 326 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 LAX1Q8IWV1 398 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 MIER2Q8N344 545 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 MS4A15Q8N5U1 240 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 OR13C4Q8NGS5 318 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 SCLYQ96I15 445 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 EML4Q9HC35 981 aaKnown RBP13.09□□□□□ -0.31
GABPB1-201ENST00000220429 BIN3Q9NQY0 253 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 PPP1R14DQ9NXH3 145 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 BABAM2Q9NXR7 383 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 CRYL1Q9Y2S2 319 aa13.09□□□□□ -0.31
GABPB1-201ENST00000220429 TUBAL3A6NHL2 446 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 HOXA2O43364 376 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 IPO13O94829 963 aaKnown RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 PLK1P53350 603 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 EEF1A1P68104 462 aaKnown RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 CYP4F8P98187 520 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 EEF1A2Q05639 463 aaKnown RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 COQ5Q5HYK3 327 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 CDKL4Q5MAI5 379 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 EEF1A1P5Q5VTE0 462 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF549Q6P9A3 640 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 FAM131AQ6UXB0 335 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 GALNT5Q7Z7M9 940 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 TBC1D19Q8N5T2 526 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF599Q96NL3 588 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 P2RY13Q9BPV8 354 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF251Q9BRH9 671 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 ZFP64Q9NPA5 681 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 CLCA3PQ9Y6N3 262 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 ANKRD12Q6UB98 2062 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 SCAMP3O14828 347 aaKnown RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 CBX7O95931 251 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 CFDP00746 253 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 HBQ1P09105 142 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 CYP4B1P13584 511 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF37AP17032 561 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 OR1D2P34982 312 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 MAP2K3P46734 347 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 RGRP47804 291 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 TIAL1Q01085 375 aaKnown RBP eCLIP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 TBCEQ15813 527 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 WSCD2Q2TBF2 565 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 DEFB115Q30KQ5 88 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 C10orf62Q5T681 223 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 SLC8B1Q6J4K2 584 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 ATRAIDQ6UW56 229 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 CUZD1Q86UP6 607 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 RNF130Q86XS8 419 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 STPG2Q8N412 459 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 OR5K1Q8NHB7 308 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 GOT1L1Q8NHS2 421 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 TRIB3Q96RU7 358 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 VN1R3Q9BXE9 311 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 FAM126AQ9BYI3 521 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 MAGEH1Q9H213 219 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 RIBC2Q9H4K1 309 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 EVLQ9UI08 416 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-201ENST00000220429 KCNK7Q9Y2U2 307 aa13.08□□□□□ -0.32
GABPB1-201ENST00000220429 SLC35F4A4IF30 521 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF840PA6NDX5 716 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 CBX4O00257 560 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 CD3EAPO15446 510 aaKnown RBP13.07□□□□□ -0.32
GABPB1-201ENST00000220429 DCTP40126 519 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 NUBP1P53384 320 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 KEAP1Q14145 624 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 MAD2L1BPQ15013 274 aaPredicted RBP13.07□□□□□ -0.32
GABPB1-201ENST00000220429 IL31Q6EBC2 164 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 TMEM179BQ7Z7N9 219 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 DENND1CQ8IV53 801 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 OR6C4Q8NGE1 309 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 OR8D4Q8NGM9 314 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 TCEAL3Q969E4 200 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 RAD51AP1Q96B01 352 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 PHF21BQ96EK2 531 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 WDFY2Q96P53 400 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 MGME1Q9BQP7 344 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 POLE3Q9NRF9 147 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 C17orf113A0A1B0GUU1 675 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 A8MXK9 166 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 COCHO43405 550 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ORC5O43913 435 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 GLP2RO95838 553 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 EFEMP2O95967 443 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 KLKB1P03952 638 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ANXA6P08133 673 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 HK1P19367 917 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 STARP49675 285 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 RGS6P49758 472 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF81P51508 661 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 SGSHP51688 502 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 CDH4P55283 916 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 LGALS3BPQ08380 585 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 GLYR1Q49A26 553 aaPredicted RBP13.07□□□□□ -0.32
GABPB1-201ENST00000220429 SLC27A4Q6P1M0 643 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 CYHR1Q6ZMK1 362 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ADGRD2Q7Z7M1 963 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms