RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SLBPQ14493 270 aaKnown RBP eCLIP12.73□□□□□ -0.37
SRP54-201ENST00000216774 DPPA4Q7L190 304 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 TECPR1Q7Z6L1 1165 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 RNF130Q86XS8 419 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 GPR65Q8IYL9 337 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 FAM83FQ8NEG4 500 aaPredicted RBP12.73□□□□□ -0.37
SRP54-201ENST00000216774 C16orf78Q8WTQ4 265 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 CIDECQ96AQ7 238 aaPredicted RBP12.73□□□□□ -0.37
SRP54-201ENST00000216774 SAMD11Q96NU1 681 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 WRAP53Q9BUR4 548 aaKnown RBP12.73□□□□□ -0.37
SRP54-201ENST00000216774 EPHX3Q9H6B9 360 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 DYRK1BQ9Y463 629 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 PRAMEF33A0A0G2JMD5 474 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 NEDD8-MDP1E9PL57 170 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 LOC110117498-PIK3R3F6TDL0 507 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 H3BM21 787 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 J3KTA2 159 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 ZW10O43264 779 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 PRAMEF10O60809 474 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 KCNK2O95069 426 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 IFNW1P05000 195 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 C1GALT1C1LP0DN25 315 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 NPPBP16860 134 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 LAG3P18627 525 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 PIK3CBP42338 1070 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 DEFA1P59665 94 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 DEFA3P59666 94 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 C2orf80Q0P641 193 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 MPEG1Q2M385 716 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 SPANXN2Q5MJ10 180 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 ATAD3BQ5T9A4 648 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 PLAG1Q6DJT9 500 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 HIST2H2AA3Q6FI13 130 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 TMEM53Q6P2H8 277 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 IKBIPQ70UQ0 350 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 ADIPOR2Q86V24 386 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 PIK3R3Q92569 461 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 Q96MT0 163 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 MGLLQ99685 303 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 SGPP1Q9BX95 441 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 SMG9Q9H0W8 520 aaKnown RBP12.73□□□□□ -0.37
SRP54-201ENST00000216774 RC3H2Q9HBD1 1191 aaKnown RBP12.73□□□□□ -0.37
SRP54-201ENST00000216774 PRDM8Q9NQV8 689 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 CLN6Q9NWW5 311 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 KCND3Q9UK17 655 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 ACSL6Q9UKU0 697 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 MAP4K5Q9Y4K4 846 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 PCDHGB6Q9Y5F9 930 aa12.73□□□□□ -0.37
SRP54-201ENST00000216774 PIPSLA2A3N6 862 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 CCRL2O00421 344 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 TGM5O43548 720 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 HSMCR30P0CW71 290 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 GJA1P17302 382 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 CYP4F2P78329 520 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 MC1RQ01726 317 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 ZNF658BQ4V348 819 aaPredicted RBP12.72□□□□□ -0.37
SRP54-201ENST00000216774 SOWAHCQ53LP3 525 aaPredicted RBP12.72□□□□□ -0.37
SRP54-201ENST00000216774 FAM92BQ6ZTR7 304 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 ATCAYQ86WG3 371 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 HEATR4Q86WZ0 1026 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 SYTL1Q8IYJ3 562 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 METTL4Q8N3J2 472 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 AQP11Q8NBQ7 271 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 GTPBP3Q969Y2 492 aaKnown RBP12.72□□□□□ -0.37
SRP54-201ENST00000216774 ZNF689Q96CS4 500 aaPredicted RBP12.72□□□□□ -0.37
SRP54-201ENST00000216774 RNF167Q9H6Y7 350 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 QPCTLQ9NXS2 382 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 GULP1Q9UBP9 304 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 A0A1W2PRB8 838 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 TRBC2A0A5B9 178 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 NRG2O14511 850 aaPredicted RBP12.72□□□□□ -0.37
SRP54-201ENST00000216774 ASNA1O43681 348 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 KIAA0513O60268 411 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 LILRB3O75022 631 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 GBAP04062 536 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 ALOX12P18054 663 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 XPAP23025 273 aaPredicted RBP12.72□□□□□ -0.37
SRP54-201ENST00000216774 CHMP24386 653 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 PDHA2P29803 388 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 SLC15A1P46059 708 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 CRISP1P54107 249 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 CRISP3P54108 245 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 TAS2R50P59544 299 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 ARSIQ5FYB1 569 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 FRMPD2BQ6IN97 320 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 ZNF770Q6IQ21 691 aaPredicted RBP12.72□□□□□ -0.37
SRP54-201ENST00000216774 TMEM220Q6QAJ8 160 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 KLHL17Q6TDP4 642 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 PTCHD4Q6ZW05 846 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 CCDC190Q86UF4 302 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 CYP4Z2PQ8N1L4 340 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 SLAIN1Q8ND83 568 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 FAM46DQ8NEK8 389 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 WDR48Q8TAF3 677 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 ERLEC1Q96DZ1 483 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 TRNT1Q96Q11 434 aaKnown RBP12.72□□□□□ -0.37
SRP54-201ENST00000216774 CCDC32Q9BV29 185 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 TAPBPLQ9BX59 468 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 DKK3Q9UBP4 350 aa12.72□□□□□ -0.37
SRP54-201ENST00000216774 RAB23Q9ULC3 237 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms