RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 C4orf51C9J302 202 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 GOLGA8NF8WBI6 632 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 RTCAO00442 366 aaKnown RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 DIAPH2O60879 1101 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 CPNE3O75131 537 aaKnown RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 MYO1DO94832 1006 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 KLHL18O94889 574 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 TNFSF15O95150 251 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 ONECUT2O95948 504 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 NTRK1P04629 796 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 PIM1P11309 404 aaPredicted RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 ACPPP15309 386 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 HIST1H1TP22492 207 aaPredicted RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 EPHA3P29320 983 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 ARFIP2P53365 341 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 TRA2BP62995 288 aaKnown RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 SNRPNP63162 240 aaKnown RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 GABREP78334 506 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 RAE1P78406 368 aaKnown RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 LSM12Q3MHD2 195 aaKnown RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 GALNTL6Q49A17 601 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 DEFB134Q4QY38 66 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 OGFOD2Q6N063 350 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 NOXRED1Q6NXP6 359 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 COMMD6Q7Z4G1 85 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 SPATA19Q7Z5L4 167 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 PIGWQ7Z7B1 504 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 NUDT13Q86X67 352 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 MARCH9Q86YJ5 346 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 ACOT4Q8N9L9 421 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 SLC38A9Q8NBW4 561 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 ZCCHC10Q8TBK6 192 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 CLIP3Q96DZ5 547 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 THOC1Q96FV9 657 aaKnown RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 FCRL1Q96LA6 429 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 ELAC2Q9BQ52 826 aaKnown RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 C17orf62Q9BQA9 187 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 EBF4Q9BQW3 602 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 COPS7BQ9H9Q2 264 aaPredicted RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 LHX9Q9NQ69 397 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 DHCR7Q9UBM7 475 aaKnown RBP11.68□□□□□ -0.54
LINC00339-213ENST00000642137 NDOR1Q9UHB4 597 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 DCTN4Q9UJW0 460 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 NAALAD2Q9Y3Q0 740 aa11.68□□□□□ -0.54
LINC00339-213ENST00000642137 WDR87Q6ZQQ6 2873 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 A0A0A6YYC8 382 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 A0A0G2JN53 185 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 A0A0G2JND7 137 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 A0A1B0GX78 115 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 PMS2P1A4D2B8 440 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 I3L1I5 382 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 B3GALT2O43825 422 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 KIAA0754O94854 1291 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 KLK1P06870 262 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 KLK3P07288 261 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 PRPS2P11908 318 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 ZNF28P17035 718 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 IL1RNP18510 177 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 MAPK1P28482 360 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 TPP2P29144 1249 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 RBMS1P29558 406 aaKnown RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 TIA1P31483 386 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 RORAP35398 523 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 SSR2P43308 183 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 GSTM5P46439 218 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 ERVK-8P63133 956 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 DCDP81605 110 aaKnown RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 ABHD18Q0P651 414 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 FOXC1Q12948 553 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 SLAMF1Q13291 335 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 RUNX2Q13950 521 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 SLC9A5Q14940 896 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 RTP5Q14D33 572 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 CCNYL2Q5T2Q4 361 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 METTL21CQ5VZV1 264 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 ZNF385CQ66K41 422 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 NXNQ6DKJ4 435 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 MRM1Q6IN84 353 aaKnown RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 ZNF793Q6ZN11 406 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 PRSS41Q7RTY9 318 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 PDSS2Q86YH6 399 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 DSELQ8IZU8 1212 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 AMER3Q8N944 861 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 FNDC5Q8NAU1 212 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 OR9A4Q8NGU2 314 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 PMEPA1Q969W9 287 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 MMABQ96EY8 250 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 GBP5Q96PP8 586 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 OR52B2Q96RD2 323 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 CCT8L2Q96SF2 557 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 DPH2Q9BQC3 489 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 SORBS1Q9BX66 1292 aaKnown RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 TMEM120AQ9BXJ8 343 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 ZNF304Q9HCX3 659 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 TCF7L2Q9NQB0 619 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 ASIC5Q9NY37 505 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 WASF3Q9UPY6 502 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 EIF3LQ9Y262 564 aaKnown RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 WBP11Q9Y2W2 641 aaKnown RBP11.67□□□□□ -0.54
LINC00339-213ENST00000642137 TMEM184BQ9Y519 407 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms