RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 ICAM3P32942 547 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 ACVR1BP36896 505 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 NT5C2P49902 561 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 ALDH3A2P51648 485 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 MNAT1P51948 309 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 BTG1P62324 171 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 ADARB1P78563 741 aaKnown RBP-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 TRIM14Q14142 442 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 ZNF674Q2M3X9 581 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 ABCA11PQ4W5N1 156 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 CYB5D1Q6P9G0 228 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 CTR9Q6PD62 1173 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 TMCO3Q6UWJ1 677 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 AMIGO1Q86WK6 493 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 RCOR2Q8IZ40 523 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 ZNF781Q8N8C0 355 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 Q8N9G6 341 aaPredicted RBP-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 NOA1Q8NC60 698 aaKnown RBP-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 ZNRF1Q8ND25 227 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 Q8NDZ9 215 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 NFKBIDQ8NI38 313 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 BLOC1S5Q8TDH9 187 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 GUCD1Q96NT3 240 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 PLK3Q9H4B4 646 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 SAMSN1Q9NSI8 373 aaKnown RBP-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 POLKQ9UBT6 870 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 CMAHPQ9Y471 501 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 SLC15A5A6NIM6 579 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 A8MVM7 634 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 F5H423 210 aaPredicted RBP-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 MEIS2O14770 477 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 TSPAN1O60635 241 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 MMP23AO75900 390 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 SRPRAP08240 638 aaKnown RBP-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 CCDC166P0CW27 439 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 VPREB1P12018 145 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 IRF2P14316 349 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 CCNCP24863 283 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 KIR3DL2P43630 455 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 RPL7AP62424 266 aaKnown RBP-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 RPS27AP62979 156 aaKnown RBP-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 NIPAL4Q0D2K0 466 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 GGTLC2Q14390 218 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 ZNF630Q2M218 657 aaPredicted RBP-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 C14orf28Q4W4Y0 310 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 CYP20A1Q6UW02 462 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 CFAP77Q6ZQR2 320 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 MDS2Q8NDY4 140 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 SYN2Q92777 582 aaPredicted RBP-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 FAM71F1Q96KD3 344 aaPredicted RBP-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 C1orf74Q96LT6 269 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 EHD1Q9H4M9 534 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 EXD2Q9NVH0 621 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 IMPAD1Q9NX62 359 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 PILRBQ9UKJ0 227 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 TBX20Q9UMR3 447 aa-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 COL5A3P25940 1745 aaPredicted RBP-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 TNKS1BP1Q9C0C2 1729 aaKnown RBP-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 MTCL1Q9Y4B5 1905 aaKnown RBP-0.25□□□□□ -2.45
LMBR1-222ENST00000638959 SDK2Q58EX2 2172 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 GSAPA4D1B5 854 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 SCAMP1O15126 338 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 NBR2O15453 112 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 PRAMEF11O60813 436 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 CREG1O75629 220 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 GJB5O95377 273 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 IGHV3-23P01764 117 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 OR9G9P0C7N8 305 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 GABRR1P24046 479 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 FEN1P39748 380 aaKnown RBP-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 SLC26A2P50443 739 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 UBASH3AP57075 661 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 CACNG7P62955 275 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 ACTA1P68133 377 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 GSTO1P78417 241 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 MCMDC2Q4G0Z9 681 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 SLC22A10Q63ZE4 541 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 OR52W1Q6IF63 320 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 PRSS55Q6UWB4 352 aaPredicted RBP-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 ABRAXAS1Q6UWZ7 409 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 MOB1BQ7L9L4 216 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 TBC1D10CQ8IV04 446 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 SYT14Q8NB59 555 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 RDH5Q92781 318 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 OR2A14Q96R47 310 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 PPIL3Q9H2H8 161 aaKnown RBP-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 TIGARQ9NQ88 270 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 ABCC13Q9NSE7 274 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 LARSQ9P2J5 1176 aaKnown RBP-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 IL36AQ9UHA7 158 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 OPN4Q9UHM6 478 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 TBX21Q9UL17 535 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 WDR83OSQ9Y284 106 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 RIPOR2Q9Y4F9 1068 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 FLVCR1Q9Y5Y0 555 aa-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.26□□□□□ -2.45
LMBR1-222ENST00000638959 KDM3AQ9Y4C1 1321 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 FAM237BA0A1B0GVD1 139 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 ANKRD62A6NC57 917 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 A6NDX4 124 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms