RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TROVE2P10155 538 aaKnown RBP eCLIP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 PVRP15151 417 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 FOLR1P15328 257 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 MAPK1P28482 360 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 SEPHS1P49903 392 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 ATP1A2P50993 1020 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 ARF3P61204 181 aaPredicted RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 TRA2BP62995 288 aaKnown RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 SHC2P98077 582 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 RBBP5Q15291 538 aaKnown RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 IMPG1Q17R60 797 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 KIF26BQ2KJY2 2108 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 TBCELQ5QJ74 424 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 SNAP47Q5SQN1 464 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 DEPDC1Q5TB30 811 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 PRAMEF9Q5VWM5 478 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 OGFOD2Q6N063 350 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 FBXO42Q6P3S6 717 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 MED25Q71SY5 747 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 VN1R4Q7Z5H5 301 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 NUDT13Q86X67 352 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 ZCCHC7Q8N3Z6 543 aaKnown RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 ARHGEF39Q8N4T4 335 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 ANKRD53Q8N9V6 530 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 RCBTB1Q8NDN9 531 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 MDM1Q8TC05 714 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 TWIST2Q8WVJ9 160 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 STARD8Q92502 1023 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 RGMAQ96B86 450 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 C19orf60Q96EN9 201 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF764Q96H86 408 aaPredicted RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 HSH2DQ96JZ2 352 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 PPP3R2Q96LZ3 170 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 OR6C1Q96RD1 312 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 NDC1Q9BTX1 674 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 TRIM55Q9BYV6 548 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 REXO4Q9GZR2 422 aaKnown RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 MEAF6Q9HAF1 191 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 ANKHQ9HCJ1 492 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 FAM60AQ9NP50 221 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 MLXIPLQ9NP71 852 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 THSD1Q9NS62 852 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 TXLNGQ9NUQ3 528 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 C14orf105Q9NVL8 296 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 TMEM45AQ9NWC5 275 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 LYARQ9NX58 379 aaKnown RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 MS4A12Q9NXJ0 267 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 ASIC5Q9NY37 505 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 VPS29Q9UBQ0 182 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 DKK4Q9UBT3 224 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 NXT1Q9UKK6 140 aaKnown RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF490Q9ULM2 529 aaPredicted RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 SH2B3Q9UQQ2 575 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 RNF11Q9Y3C5 154 aa6.39□□□□□ -1.39
UPF3B-205ENST00000636792 TMEM184BQ9Y519 407 aaPredicted RBP6.39□□□□□ -1.39
UPF3B-205ENST00000636792 FER1L5A0AVI2 2057 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 A0A0J9YVX5 310 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 GOLGA8QA0A0J9YX86 632 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 FEZF1A0PJY2 475 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 WDR91A4D1P6 747 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 GOLGA8OA6NCC3 632 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 LRIT2A6NDA9 550 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 MAGEB17A8MXT2 336 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 CDRT15L2A8MXV6 281 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 GOLGA8NF8WBI6 632 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SHOX2O60902 331 aaPredicted RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SCRG1O75711 98 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 KLK3P07288 261 aaPredicted RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 PRR35P0CG20 571 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SMIM10L1P0DMW3 83 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 PCNAP12004 261 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ALOX12P18054 663 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 MPSTP25325 297 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 NOS3P29474 1203 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 SSTR4P31391 388 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ARRB2P32121 409 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 RPL3P39023 403 aaKnown RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 AVPR1BP47901 424 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 MRPL19P49406 292 aaKnown RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 RAP1GDS1P52306 607 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 MTTPP55157 894 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 VSX2P58304 361 aaPredicted RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 PSMA6P60900 246 aaKnown RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 FOXM1Q08050 763 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 CYP4F3Q08477 520 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ACSM2AQ08AH3 577 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 BIKQ13323 160 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 GPR19Q15760 415 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 UGT3A2Q3SY77 523 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ATP6AP1LQ52LC2 224 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 WASHC2DQ5SRD0 308 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ACSM2BQ68CK6 577 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 FRMPD2BQ6IN97 320 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF517Q6ZMY9 492 aaPredicted RBP6.38□□□□□ -1.39
UPF3B-205ENST00000636792 IKBIPQ70UQ0 350 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 ERMP1Q7Z2K6 904 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 VN1R5Q7Z5H4 357 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 TMEM126BQ8IUX1 230 aa6.38□□□□□ -1.39
UPF3B-205ENST00000636792 METTL4Q8N3J2 472 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms