RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 HIST2H2AA3Q6FI13 130 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 MTFR2Q6P444 385 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 TRIM40Q6P9F5 258 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 SLCO4C1Q6ZQN7 724 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 KLHDC8AQ8IYD2 350 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 CA13Q8N1Q1 262 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 SPATA6LQ8N4H0 392 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 AMER2Q8N7J2 671 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 CREB3L4Q8TEY5 395 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 MAGED4Q96JG8 741 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 GPR22Q99680 433 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 DEFB126Q9BYW3 111 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 KLHL31Q9H511 634 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 LRFN1Q9P244 771 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 PCNX1Q96RV3 2341 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 FAM159BA6NKW6 160 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 A8MUA0 341 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 CXorf49A8MYA2 514 aaPredicted RBP16.8■□□□□ 0.28
PNKP-225ENST00000636214 CCNT2O60583 730 aaKnown RBP16.8■□□□□ 0.28
PNKP-225ENST00000636214 DNAJB6O75190 326 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 CLEC3AO75596 197 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 CD1DP15813 335 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 DCTP40126 519 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 CD96P40200 585 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 HSPA7P48741 367 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 RAB10P61026 200 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 BTG2P78543 158 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 PMP22Q01453 160 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 ALDH6A1Q02252 535 aaKnown RBP16.8■□□□□ 0.28
PNKP-225ENST00000636214 HYAL2Q12891 473 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 XKR6Q5GH73 641 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 GRTP1Q5TC63 336 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 ZNF787Q6DD87 383 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 CYS1Q717R9 158 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 PPM1NQ8N819 430 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 MDS2Q8NDY4 140 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 ELP5Q8TE02 316 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 TMEM125Q96AQ2 219 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 PTCD3Q96EY7 689 aaKnown RBP16.8■□□□□ 0.28
PNKP-225ENST00000636214 SIGLEC12Q96PQ1 595 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 MCMBPQ9BTE3 642 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 EFCAB11Q9BUY7 163 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 NPLQ9BXD5 320 aaPredicted RBP16.8■□□□□ 0.28
PNKP-225ENST00000636214 PHACTR1Q9C0D0 580 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 EHD1Q9H4M9 534 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 NT5DC2Q9H857 520 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 SH3BGRL2Q9UJC5 107 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 CROCCQ5TZA2 2017 aa16.8■□□□□ 0.28
PNKP-225ENST00000636214 CRYBG3Q68DQ2 2970 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 A0A0G2JN53 185 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 TCRBV16S1A1N1A0A5B0 115 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 SYNDIG1LA6NDD5 238 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 SLC25A12O75746 678 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 SMIM10L1P0DMW3 83 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 MST1P26927 711 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 CYB561P49447 251 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 CLCN2P51788 898 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 PLA2G16P53816 162 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 RAB38P57729 211 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 LAPTM5Q13571 262 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 SPINK14Q6IE38 97 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 SLC25A25Q6KCM7 469 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 TBC1D1Q86TI0 1168 aaPredicted RBP16.79■□□□□ 0.28
PNKP-225ENST00000636214 SLC34A3Q8N130 599 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 KIF2BQ8N4N8 673 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 RELTQ969Z4 430 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 SMIM10Q96HG1 83 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 CCDC77Q9BR77 488 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 TMEM79Q9BSE2 394 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 REXO4Q9GZR2 422 aaKnown RBP16.79■□□□□ 0.28
PNKP-225ENST00000636214 PRTFDC1Q9NRG1 225 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 PNO1Q9NRX1 252 aaKnown RBP16.79■□□□□ 0.28
PNKP-225ENST00000636214 GRHL1Q9NZI5 618 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 COPG2Q9UBF2 871 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 ITPR2Q14571 2701 aa16.79■□□□□ 0.28
PNKP-225ENST00000636214 CTAGE15A4D2H0 777 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 CCL21O00585 134 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 MYO1DO94832 1006 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 SP1P08047 785 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 ESRRAP11474 423 aaPredicted RBP16.78■□□□□ 0.28
PNKP-225ENST00000636214 ST13P50502 369 aaKnown RBP16.78■□□□□ 0.28
PNKP-225ENST00000636214 HSD17B7P56937 341 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 IRF8Q02556 426 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 SLC13A2Q13183 592 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 NAB1Q13506 487 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 MAPKAPK3Q16644 382 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 KBTBD12Q3ZCT8 623 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 KRTCAP3Q53RY4 240 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 FBXO48Q5FWF7 155 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 LRRC70Q7Z2Q7 622 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 GALNTL5Q7Z4T8 443 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 CTAGE6Q86UF2 777 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 SRFBP1Q8NEF9 429 aaKnown RBP16.78■□□□□ 0.28
PNKP-225ENST00000636214 OR2L5Q8NG80 312 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 STAG3L4Q8TBR4 150 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 KIAA1191Q96A73 305 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 MS4A6EQ96DS6 147 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 SCMH1Q96GD3 660 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 NPAS2Q99743 824 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 ROGDIQ9GZN7 287 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms