RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 LUZP4Q9P127 313 aa18.92■□□□□ 0.62
R3HCC1-210ENST00000625275 VPS4AQ9UN37 437 aa18.92■□□□□ 0.62
R3HCC1-210ENST00000625275 MAP4K5Q9Y4K4 846 aa18.92■□□□□ 0.62
R3HCC1-210ENST00000625275 A0A0J9YVX5 310 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 TRBC2A0A5B9 178 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 ONECUT2O95948 504 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 CHRNGP07510 517 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 BCL6P41182 706 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 UQCRFS1P47985 274 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 MYBPC3Q14896 1274 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 ARL13AQ5H913 290 aaPredicted RBP18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 LIPJQ5W064 366 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 FAM219BQ5XKK7 198 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 FRMPD2BQ6IN97 320 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 GRHL2Q6ISB3 625 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 GPRIN3Q6ZVF9 776 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 OVCH1Q7RTY7 1134 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 MILR1Q7Z6M3 343 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 GALNT16Q8N428 558 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 ARFGAP2Q8N6H7 521 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 Q8NA96 180 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 AGAP11Q8TF27 550 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 SARGQ9BW04 601 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 MID1IP1Q9NPA3 183 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 SLAMF7Q9NQ25 335 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 STK38LQ9Y2H1 464 aa18.91■□□□□ 0.62
R3HCC1-210ENST00000625275 KCNE1BA0A087WTH5 132 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 FITM1A5D6W6 292 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 OR1F1O43749 312 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 LCMT2O60294 686 aaKnown RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 KLHL41O60662 606 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 OR4F21O95013 312 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 ALBP02768 609 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 ALPPP05187 535 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 CXCR2P25025 360 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 GRK2P25098 689 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 SERPINB5P36952 375 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 HNF4AP41235 474 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 PKNOX1P55347 436 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 VSX2P58304 361 aaPredicted RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 RPS15AP62244 130 aaKnown RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 GGTA1PQ4G0N0 100 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 PAGE2BQ5JRK9 111 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 TMIGD1Q6UXZ0 262 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 COX15Q7KZN9 410 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 ANKRD53Q8N9V6 530 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 OR2A5Q96R48 311 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 SHCBP1LQ9BZQ2 653 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 SLC26A1Q9H2B4 701 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 TNFRSF12AQ9NP84 129 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 ZNF490Q9ULM2 529 aaPredicted RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 ZGRF1Q86YA3 2104 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 LOC105369274A0A096LPK9 316 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 LOC102723532A0A0G2JNH3 316 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 TMEM114B3SHH9 223 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 ITM2AO43736 263 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 SRPX2O60687 465 aaPredicted RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 ESRRBO95718 433 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 GNLYP22749 145 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 MMP11P24347 488 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 GALNT1Q10472 559 aaPredicted RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 BST1Q10588 318 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 LAPTM5Q13571 262 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 INPP5JQ15735 1006 aaPredicted RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 NKG7Q16617 165 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 CPSF6Q16630 551 aaKnown RBP eCLIP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 FAM214AQ32MH5 1076 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 PRR30Q53SZ7 412 aaPredicted RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 ADNP2Q6IQ32 1131 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 OR4N4Q8N0Y3 316 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 KRT78Q8N1N4 520 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 RAB3IL1Q8TBN0 382 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 DYDC1Q8WWB3 177 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 NACC2Q96BF6 587 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 SPSB2Q99619 263 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 C20orf27Q9GZN8 174 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 PITHD1Q9GZP4 211 aaPredicted RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 MANSC1Q9H8J5 431 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 ZNF395Q9H8N7 513 aaPredicted RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 TRPS1Q9UHF7 1281 aa18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 NXT1Q9UKK6 140 aaKnown RBP18.9■□□□□ 0.62
R3HCC1-210ENST00000625275 LYPLA1O75608 230 aaPredicted RBP18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 SCTRP47872 440 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 ABCE1P61221 599 aaKnown RBP18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 STX3Q13277 289 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 RBBP5Q15291 538 aaKnown RBP18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 WASHC2DQ5SRD0 308 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 MED27Q6P2C8 311 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 VN1R4Q7Z5H5 301 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 CUZD1Q86UP6 607 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 TRIM42Q8IWZ5 723 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 LAS2Q8IYD9 372 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 TBC1D19Q8N5T2 526 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 METTL27Q8N6F8 245 aaPredicted RBP18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 CDYL2Q8N8U2 506 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 MFSD9Q8NBP5 474 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 FAM76AQ8TAV0 307 aa18.89■□□□□ 0.61
R3HCC1-210ENST00000625275 NT5DC2Q9H857 520 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms