RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 C5orf22Q49AR2 442 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 CRB2Q5IJ48 1285 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 CBLL1Q75N03 491 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 GAREM2Q75VX8 874 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 LAPTM4BQ86VI4 370 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 ANKRD13BQ86YJ7 626 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 SLC30A8Q8IWU4 369 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 KLHL6Q8WZ60 621 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 FOXJ1Q92949 421 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 TMEM203Q969S6 136 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 DIRAS2Q96HU8 199 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 DEPDC7Q96QD5 511 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 PIP5K1AQ99755 562 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 SPATA9Q9BWV2 254 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 IGFLR1Q9H665 355 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 ABCB9Q9NP78 766 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 ADAM30Q9UKF2 790 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 CCDC182A6NF36 153 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 H7BY64 318 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 CASKO14936 926 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 IDH3BO43837 385 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 ITGAMP11215 1152 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 ACP5P13686 325 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 FUT4P22083 530 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 DAPP51397 102 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 YBX1P67809 324 aaKnown RBP8.34□□□□□ -1.07
LIG4-204ENST00000611712 PPP2R2BQ00005 443 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 RELAQ04206 551 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 LMNTD1Q8N9Z9 388 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 ADAMTS15Q8TE58 950 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 MUL1Q969V5 352 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 ISG20Q96AZ6 181 aaKnown RBP8.34□□□□□ -1.07
LIG4-204ENST00000611712 PRAP1Q96NZ9 151 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 CPEB1Q9BZB8 566 aaKnown RBP8.34□□□□□ -1.07
LIG4-204ENST00000611712 BHLHE41Q9C0J9 482 aaPredicted RBP8.34□□□□□ -1.07
LIG4-204ENST00000611712 EHD1Q9H4M9 534 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 NTN4Q9HB63 628 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 KLHL1Q9NR64 748 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 GPC6Q9Y625 555 aaPredicted RBP8.34□□□□□ -1.07
LIG4-204ENST00000611712 FZD6O60353 706 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 CCL5P13501 91 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 LHCGRP22888 699 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 DDX6P26196 483 aaKnown RBP eCLIP8.34□□□□□ -1.07
LIG4-204ENST00000611712 PDHA2P29803 388 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 TIE1P35590 1138 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 CCT3P49368 545 aaKnown RBP8.34□□□□□ -1.07
LIG4-204ENST00000611712 NCBP2P52298 156 aaKnown RBP eCLIP8.34□□□□□ -1.07
LIG4-204ENST00000611712 SELENOWP63302 87 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 GRSF1Q12849 480 aaKnown RBP eCLIP8.34□□□□□ -1.07
LIG4-204ENST00000611712 SLC13A2Q13183 592 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 UGT8Q16880 541 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 PYCR3Q53H96 274 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 CDC73Q6P1J9 531 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 PSRC1Q6PGN9 363 aaPredicted RBP8.34□□□□□ -1.07
LIG4-204ENST00000611712 Q6ZPB1 254 aaPredicted RBP8.34□□□□□ -1.07
LIG4-204ENST00000611712 OOSP2Q86WS3 158 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 SNX29P2Q8IUI4 249 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 L3MBTL4Q8NA19 623 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 OR9Q2Q8NGE9 314 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 OR52N2Q8NGI0 321 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 RGMAQ96B86 450 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 C1QTNF7Q9BXJ2 289 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 PCBD2Q9H0N5 130 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 ACTL8Q9H568 366 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 PTGFRNQ9P2B2 879 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 HSFX1Q9UBD0 423 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 PPT2Q9UMR5 302 aa8.34□□□□□ -1.07
LIG4-204ENST00000611712 WDR81Q562E7 1941 aa8.34□□□□□ -1.08
LIG4-204ENST00000611712 KNL1Q8NG31 2342 aa8.34□□□□□ -1.08
LIG4-204ENST00000611712 TRBV23OR9-2A0A075B6M9 112 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 TLX2O43763 284 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 KCNK5O95279 499 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 RB1P06400 928 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 PORP16435 677 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 GADD45AP24522 165 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 C21orf33P30042 268 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 TLX1P31314 330 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 CRISP3P54108 245 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 RGS8P57771 180 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 DEFB103AP81534 67 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 GGTA1PQ4G0N0 100 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 ARMC6Q6NXE6 501 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 C8orf82Q6P1X6 216 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 PLEKHM3Q6ZWE6 761 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 TCEANCQ8N8B7 351 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 FAM46DQ8NEK8 389 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 SMPDL3AQ92484 453 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 PIK3R3Q92569 461 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 CIDECQ96AQ7 238 aaPredicted RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 MGLLQ99685 303 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 DSN1Q9H410 356 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 BTNL2Q9UIR0 455 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 KIAA0100Q14667 2235 aaKnown RBP8.33□□□□□ -1.08
LIG4-204ENST00000611712 CENPXA8MT69 81 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 M0R129 80 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 ZW10O43264 779 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 JRKO75564 520 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 SERPINI2O75830 405 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 CKMT1AP12532 417 aa8.33□□□□□ -1.08
LIG4-204ENST00000611712 JUNBP17275 347 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms