RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SUSD1Q6UWL2 747 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 GPR149Q86SP6 731 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 VSIG10LQ86VR7 867 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 TTC16Q8NEE8 873 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 CHST13Q8NET6 341 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 MOSPD2Q8NHP6 518 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 SPATA22Q8NHS9 363 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 EDARADDQ8WWZ3 215 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 CREB3L1Q96BA8 519 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 ULK4Q96C45 1275 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 PGAP3Q96FM1 320 aaPredicted RBP12.09□□□□□ -0.47
CTCFL-218ENST00000608440 SCRN2Q96FV2 425 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 PITX2Q99697 317 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 PAPOLGQ9BWT3 736 aaKnown RBP12.09□□□□□ -0.47
CTCFL-218ENST00000608440 HDHD2Q9H0R4 259 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 GABARAPL1Q9H0R8 117 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 ATXN3LQ9H3M9 355 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 ABHD16BQ9H3Z7 469 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 EVA1AQ9H8M9 152 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 USP3Q9Y6I4 520 aa12.09□□□□□ -0.47
CTCFL-218ENST00000608440 A0A0G2JMZ2 1700 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 ZNF670-ZNF695F2Z2N8 137 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 CD3EAPO15446 510 aaKnown RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 NBNO60934 754 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 OR4F21O95013 312 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 POMCP01189 267 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 S100A9P06702 114 aaKnown RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 OPCMLQ14982 345 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 C22orf42Q6IC83 251 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 OR4F3Q6IEY1 312 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 TRMT11Q7Z4G4 463 aaKnown RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 RAB44Q7Z6P3 723 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 VTCN1Q7Z7D3 282 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 PDZD3Q86UT5 571 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 OR8J3Q8NGG0 315 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 OR9Q1Q8NGQ5 310 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 OR2T35Q8NGX2 323 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 EMID1Q96A84 441 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 SLC25A46Q96AG3 418 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 NARS2Q96I59 477 aaKnown RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 C10orf90Q96M02 699 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 SLC38A2Q96QD8 506 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 SLC38A3Q99624 504 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 BRINP2Q9C0B6 783 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 NUDT15Q9NV35 164 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 THUMPD1Q9NXG2 353 aaKnown RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 CENPFP49454 3210 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 NCF1BA6NI72 391 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 NCF1CA8MVU1 366 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 HBQ1P09105 142 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 OR56A5P0C7T3 313 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 NCF1P14598 390 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 ITGB8P26012 769 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 CRYBB2P43320 205 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 VLDLRP98155 873 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 SLC6A3Q01959 620 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 SF3A2Q15428 464 aaKnown RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 C6orf136Q5SQH8 315 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 MILR1Q7Z6M3 343 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 STX12Q86Y82 276 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 ESAMQ96AP7 390 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 OTUB1Q96FW1 271 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 ERMAPQ96PL5 475 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 CYP2S1Q96SQ9 504 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 WDR77Q9BQA1 342 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 H2AFJQ9BTM1 129 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 MED18Q9BUE0 208 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 APOL5Q9BWW9 433 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 NKX6-2Q9C056 277 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 ABCG4Q9H172 646 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 MAGIXQ9H6Y5 334 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 ANKRA2Q9H9E1 313 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 BEX1Q9HBH7 125 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 PLCXD1Q9NUJ7 323 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 ZIM2Q9NZV7 527 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 SEC14L4Q9UDX3 406 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 NDRG3Q9UGV2 375 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 MKL2Q9ULH7 1088 aa12.08□□□□□ -0.48
CTCFL-218ENST00000608440 CFAP20Q9Y6A4 193 aaKnown RBP12.08□□□□□ -0.48
CTCFL-218ENST00000608440 ERI2A8K979 691 aaKnown RBP12.07□□□□□ -0.48
CTCFL-218ENST00000608440 ACKR2O00590 384 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 DPYSL4O14531 572 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 TGM6O95932 706 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 MT-CYBP00156 380 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-218ENST00000608440 EGFP01133 1207 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 FGF2P09038 288 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 TKTL1P51854 596 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 CDKN2DP55273 166 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 DSC2Q02487 901 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 FAM74A1Q5RGS3 127 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 SFRP5Q5T4F7 317 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 HECTD2Q5U5R9 776 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 LIPKQ5VXJ0 399 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 FAM180BQ6P0A1 224 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 ZER1Q7Z7L7 766 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 ADGRF3Q8IZF5 1079 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 C2CD4AQ8NCU7 369 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-218ENST00000608440 GANCQ8TET4 914 aa12.07□□□□□ -0.48
CTCFL-218ENST00000608440 TMEM43Q9BTV4 400 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms