RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 TRMT6Q9UJA5 497 aaKnown RBP11.53□□□□□ -0.56
HLA-F-230ENST00000606273 SLC39A10Q9ULF5 831 aa11.53□□□□□ -0.56
HLA-F-230ENST00000606273 CORO1CQ9ULV4 474 aaPredicted RBP11.53□□□□□ -0.56
HLA-F-230ENST00000606273 COLEC10Q9Y6Z7 277 aa11.53□□□□□ -0.56
HLA-F-230ENST00000606273 GSAPA4D1B5 854 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 MATN2O00339 956 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 BTN3A1O00481 513 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 PHGDHO43175 533 aaKnown RBP11.52□□□□□ -0.57
HLA-F-230ENST00000606273 PSIP1O75475 530 aaKnown RBP11.52□□□□□ -0.57
HLA-F-230ENST00000606273 RNASE1P07998 156 aaKnown RBP11.52□□□□□ -0.57
HLA-F-230ENST00000606273 MPC1LP0DKB6 136 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 PVRP15151 417 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 IGFBP2P18065 325 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 NDUFS1P28331 727 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 PEBP1P30086 187 aaKnown RBP11.52□□□□□ -0.57
HLA-F-230ENST00000606273 PHBP35232 272 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 SLC29A2Q14542 456 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 TUBB8Q3ZCM7 444 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 GRTP1Q5TC63 336 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 Q6ZPB1 254 aaPredicted RBP11.52□□□□□ -0.57
HLA-F-230ENST00000606273 NCCRP1Q6ZVX7 275 aaPredicted RBP11.52□□□□□ -0.57
HLA-F-230ENST00000606273 TRMT10CQ7L0Y3 403 aaKnown RBP11.52□□□□□ -0.57
HLA-F-230ENST00000606273 CMC1Q7Z7K0 106 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 BIVMQ86UB2 503 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 SPPL2CQ8IUH8 684 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 ADGRF3Q8IZF5 1079 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 SPATA6LQ8N4H0 392 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 C2orf73Q8N5S3 287 aaPredicted RBP11.52□□□□□ -0.57
HLA-F-230ENST00000606273 LINC01555Q8NAE3 123 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 FLVCR1-AS1Q8TAF5 88 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 CA5BP1Q8WTZ4 195 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 LCN9Q8WX39 176 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 ASB11Q8WXH4 323 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 PSMF1Q92530 271 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 NINJ1Q92982 152 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 LINGO1Q96FE5 620 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 HRASLS5Q96KN8 279 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 CYTH2Q99418 400 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 SMR3AQ99954 134 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 PARD6BQ9BYG5 372 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 SPHK1Q9NYA1 384 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 HEBP2Q9Y5Z4 205 aa11.52□□□□□ -0.57
HLA-F-230ENST00000606273 GFYI3L273 518 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 SHBGP04278 402 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 ZNF37AP17032 561 aaPredicted RBP11.51□□□□□ -0.57
HLA-F-230ENST00000606273 PKLRP30613 574 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 SKIV2L2P42285 1042 aaKnown RBP11.51□□□□□ -0.57
HLA-F-230ENST00000606273 GABRA4P48169 554 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 ADAM8P78325 824 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 FOLH1Q04609 750 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 NAB1Q13506 487 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 FASTKQ14296 549 aaKnown RBP11.51□□□□□ -0.57
HLA-F-230ENST00000606273 ZKSCAN8Q15776 578 aaPredicted RBP11.51□□□□□ -0.57
HLA-F-230ENST00000606273 PHKG1Q16816 387 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 TTLL9Q3SXZ7 439 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 WDR93Q6P2C0 686 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 NEK10Q6ZWH5 1172 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 CXXC5Q7LFL8 322 aaKnown RBP11.51□□□□□ -0.57
HLA-F-230ENST00000606273 OVCH1Q7RTY7 1134 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 TMEM200AQ86VY9 491 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 AMIGO1Q86WK6 493 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 DCUN1D3Q8IWE4 304 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 OR11G2Q8NGC1 345 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 AENQ8WTP8 325 aaKnown RBP11.51□□□□□ -0.57
HLA-F-230ENST00000606273 DCAKDQ8WVC6 231 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 SLC44A1Q8WWI5 657 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 PAFAH2Q99487 392 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 PKP4Q99569 1192 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 SRMSQ9H3Y6 488 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 TXNDC16Q9P2K2 825 aa11.51□□□□□ -0.57
HLA-F-230ENST00000606273 A0A087WUV0 522 aaPredicted RBP11.5□□□□□ -0.57
HLA-F-230ENST00000606273 POC1B-GALNT4F8VUJ3 575 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 PRAMEF2O60811 474 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 ABHD2P08910 425 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 ENO3P13929 434 aaPredicted RBP11.5□□□□□ -0.57
HLA-F-230ENST00000606273 SPRP35270 261 aaPredicted RBP11.5□□□□□ -0.57
HLA-F-230ENST00000606273 IRF9Q00978 393 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 POU4F1Q01851 419 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 DLG1Q12959 904 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 USP10Q14694 798 aaKnown RBP11.5□□□□□ -0.57
HLA-F-230ENST00000606273 NKG7Q16617 165 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 MROH9Q5TGP6 573 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 TMEM198Q66K66 360 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 UGT3A1Q6NUS8 523 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 MBOAT1Q6ZNC8 495 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 ATG4DQ86TL0 474 aaPredicted RBP11.5□□□□□ -0.57
HLA-F-230ENST00000606273 TRIM73Q86UV7 250 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 TAX1BP1Q86VP1 789 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 ZNF655Q8N720 491 aaPredicted RBP11.5□□□□□ -0.57
HLA-F-230ENST00000606273 THAP3Q8WTV1 239 aaPredicted RBP11.5□□□□□ -0.57
HLA-F-230ENST00000606273 N4BP2L2Q92802 583 aaPredicted RBP11.5□□□□□ -0.57
HLA-F-230ENST00000606273 ARSGQ96EG1 525 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 ZNF559Q9BR84 538 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.5□□□□□ -0.57
HLA-F-230ENST00000606273 WDR54Q9H977 334 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 TXLNGQ9NUQ3 528 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 PTGFRNQ9P2B2 879 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 POLG2Q9UHN1 485 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 PDE10AQ9Y233 779 aa11.5□□□□□ -0.57
HLA-F-230ENST00000606273 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms