RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 PRSS58Q8IYP2 241 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 L3MBTL4Q8NA19 623 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 PLPP5Q8NEB5 264 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 OR2L5Q8NG80 312 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 OR5T3Q8NGG3 340 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 ZNF473Q8WTR7 871 aaKnown RBP15.26■□□□□ 0.03
LSM4-206ENST00000600289 TBC1D20Q96BZ9 403 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 SCYL1Q96KG9 808 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 QRFPRQ96P65 431 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 MS4A8Q9BY19 250 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 VN1R1Q9GZP7 353 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 ZNF700Q9H0M5 742 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 ZNF71Q9NQZ8 489 aaPredicted RBP15.26■□□□□ 0.03
LSM4-206ENST00000600289 LANCL2Q9NS86 450 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 ANAPC2Q9UJX6 822 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 PCTPQ9UKL6 214 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 MKL2Q9ULH7 1088 aa15.26■□□□□ 0.03
LSM4-206ENST00000600289 IGHV1-45A0A0A0MS14 117 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 ZNF860A6NHJ4 632 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 H0YIV9 168 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 CHST10O43529 356 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 CDH16O75309 829 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 JRKO75564 520 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 SIX3O95343 332 aaPredicted RBP15.25■□□□□ 0.03
LSM4-206ENST00000600289 FHP07954 510 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 RPS17P08708 135 aaKnown RBP15.25■□□□□ 0.03
LSM4-206ENST00000600289 C8orf89P0DMQ9 161 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 JAK1P23458 1154 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 EEF1DP29692 281 aaKnown RBP15.25■□□□□ 0.03
LSM4-206ENST00000600289 PIK3CBP42338 1070 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 ARFIP1P53367 373 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 RHAGQ02094 409 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 KLRB1Q12918 225 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 ADNP2Q6IQ32 1131 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 TRIM40Q6P9F5 258 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 SH2D5Q6ZV89 423 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 SRFBP1Q8NEF9 429 aaKnown RBP15.25■□□□□ 0.03
LSM4-206ENST00000600289 OR7G3Q8NG95 312 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 CAVIN3Q969G5 261 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 PEX11GQ96HA9 241 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 NTMT1Q9BV86 223 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 REXO4Q9GZR2 422 aaKnown RBP15.25■□□□□ 0.03
LSM4-206ENST00000600289 IPPKQ9H8X2 491 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 RIC8BQ9NVN3 520 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 PSD3Q9NYI0 1048 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 TMEM216Q9P0N5 145 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 C19orf25Q9UFG5 118 aaPredicted RBP15.25■□□□□ 0.03
LSM4-206ENST00000600289 PCDHGA11Q9Y5H2 935 aa15.25■□□□□ 0.03
LSM4-206ENST00000600289 OTOGQ6ZRI0 2925 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 NSG1A0A0A6YYJ2 146 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 LRRC14BA6NHZ5 514 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 A8MT66 165 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 MAGEB17A8MXT2 336 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 OR7A17O14581 309 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 ERI3O43414 337 aaKnown RBP15.24■□□□□ 0.03
LSM4-206ENST00000600289 SCELO95171 688 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 RNH1P13489 461 aaKnown RBP15.24■□□□□ 0.03
LSM4-206ENST00000600289 NR1D1P20393 614 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 TSFMP43897 325 aaKnown RBP15.24■□□□□ 0.03
LSM4-206ENST00000600289 TGM3Q08188 693 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 PCOLCEQ15113 449 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 GGTA1PQ4G0N0 100 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 TMEM35AQ53FP2 167 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 C10orf62Q5T681 223 aaPredicted RBP15.24■□□□□ 0.03
LSM4-206ENST00000600289 ABHD17CQ6PCB6 329 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 IGFL3Q6UXB1 125 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 QSOX2Q6ZRP7 698 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 SHISA5Q8N114 240 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 CA13Q8N1Q1 262 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 RIBC1Q8N443 379 aaPredicted RBP15.24■□□□□ 0.03
LSM4-206ENST00000600289 ADAMTS18Q8TE60 1221 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 METTL21AQ8WXB1 218 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 CCT6BQ92526 530 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 C8orf44Q96CB5 159 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 REPS1Q96D71 796 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 PHF21BQ96EK2 531 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 FAR2Q96K12 515 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 MAGEB10Q96LZ2 347 aaPredicted RBP15.24■□□□□ 0.03
LSM4-206ENST00000600289 MESP1Q9BRJ9 268 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 ROGDIQ9GZN7 287 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 LHPPQ9H008 270 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 ZNF552Q9H707 407 aaPredicted RBP15.24■□□□□ 0.03
LSM4-206ENST00000600289 ACTR8Q9H981 624 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 TBK1Q9UHD2 729 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 DCDC2Q9UHG0 476 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 PPT2Q9UMR5 302 aa15.24■□□□□ 0.03
LSM4-206ENST00000600289 GLRA3O75311 464 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 CLDN9O95484 217 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 B3GALT4O96024 378 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 ALPPP05187 535 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 PYGBP11216 843 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 CASRP41180 1078 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 AP2B1P63010 937 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 EEF1A2Q05639 463 aaKnown RBP15.23■□□□□ 0.03
LSM4-206ENST00000600289 Q0VFX4 171 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 MINDY4Q4G0A6 757 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 RIPOR1Q6ZS17 1223 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 MREGQ8N565 214 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 EPS8L3Q8TE67 593 aaKnown RBP15.23■□□□□ 0.03
LSM4-206ENST00000600289 ZNF483Q8TF39 744 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms