RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 FAM45BPQ6NSW5 357 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 NXPE4Q6UWF7 544 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 KIAA0408Q6ZU52 694 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 THOC6Q86W42 341 aaKnown RBP9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 CYP4Z2PQ8N1L4 340 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 CA13Q8N1Q1 262 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 ANKRD53Q8N9V6 530 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 B3GNT7Q8NFL0 401 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 OR52N2Q8NGI0 321 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 FAM45AQ8TCE6 357 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 ASB5Q8WWX0 329 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 CCT6BQ92526 530 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 CERS2Q96G23 380 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 PDLIM2Q96JY6 352 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 FAR2Q96K12 515 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 CCDC77Q9BR77 488 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 SLC6A16Q9GZN6 736 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 DEFB127Q9H1M4 99 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 SLC17A6Q9P2U8 582 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 ASIC3Q9UHC3 531 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 ERVK-11Q9UQG0 969 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 SLC22A14Q9Y267 594 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 KCNE2Q9Y6J6 123 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 IGKV3D-11A0A0A0MRZ8 115 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 A0A0G2JN53 185 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 GOLGA6L10A0A0M3HER8 536 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 CTAGE15A4D2H0 777 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 NKX2-6A6NCS4 301 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 FAM90A27PA6NNH2 459 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 PGRMC1O00264 195 aaKnown RBP9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 DNALI1O14645 258 aaPredicted RBP9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 NRDCO43847 1150 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 H2AFYO75367 372 aaKnown RBP9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 SERPINA6P08185 405 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 SMIM10L1P0DMW3 83 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 SSR4P51571 173 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 STXBP1P61764 594 aaKnown RBP9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 PLGLB1Q02325 96 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 CMPK2Q5EBM0 449 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 HP1BP3Q5SSJ5 553 aaPredicted RBP9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 TEDDM1Q5T9Z0 273 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 PAOXQ6QHF9 649 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 MDGA2Q7Z553 956 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 CTAGE6Q86UF2 777 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 LRRC8AQ8IWT6 810 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 CNTN4Q8IWV2 1026 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 APCDD1LQ8NCL9 501 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 C16orf52Q8NHV5 167 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 RND1Q92730 232 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 NCLNQ969V3 563 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 CFAP36Q96G28 342 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 VMP1Q96GC9 406 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 SMIM10Q96HG1 83 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 EGFL8Q99944 293 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 NAT9Q9BTE0 207 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 UCK2Q9BZX2 261 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 TP63Q9H3D4 680 aaPredicted RBP9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 TIMMDC1Q9NPL8 285 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 PRTFDC1Q9NRG1 225 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 CORO1CQ9ULV4 474 aaPredicted RBP9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 RNF6Q9Y252 685 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 PPP2R2CQ9Y2T4 447 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 JRKLQ9Y4A0 524 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 MMACHCQ9Y4U1 282 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 HRH3Q9Y5N1 445 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 SPG11Q96JI7 2443 aa9.85□□□□□ -0.83
CHMP2A-202ENST00000596708 FBN2P35556 2912 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 A8MVJ9 347 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 FOXO6A8MYZ6 492 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 C4orf51C9J302 202 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 CLDN4O14493 209 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 ZFAND5O76080 213 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 FNTAP49354 379 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 RAB38P57729 211 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 SLC13A2Q13183 592 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 RUNX2Q13950 521 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 MSS51Q4VC12 460 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 ARHGAP11AQ6P4F7 1023 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 SBSNQ6UWP8 590 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 IL20RBQ6UXL0 311 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 GALNT7Q86SF2 657 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 IGDCC3Q8IVU1 814 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 ARMC10Q8N2F6 343 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 MARVELD2Q8N4S9 558 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 ZFP62Q8NB50 900 aaPredicted RBP9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 CREB3L4Q8TEY5 395 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 SREK1Q8WXA9 508 aaKnown RBP9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 PDLIM5Q96HC4 596 aaKnown RBP9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 LIN28AQ9H9Z2 209 aaKnown RBP9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 KCNJ16Q9NPI9 418 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 HPF1Q9NWY4 346 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 KCMF1Q9P0J7 381 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 IKZF3Q9UKT9 509 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 CHMP2BQ9UQN3 213 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 MRPS33Q9Y291 106 aaKnown RBP9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 YARS2Q9Y2Z4 477 aaKnown RBP9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 AKAP6Q13023 2319 aa9.84□□□□□ -0.83
CHMP2A-202ENST00000596708 PRRC2AP48634 2157 aaKnown RBP9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 A0A088AWK7 358 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 NPEPPSL1A6NEC2 478 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms