RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 PPP2R1BP30154 601 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 CDKN2DP55273 166 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 AP1S2P56377 157 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 REEP5Q00765 189 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 TERF2Q15554 542 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 RBM20Q5T481 1227 aaKnown RBP9.28□□□□□ -0.92
LIG1-209ENST00000596104 CES4AQ5XG92 561 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 C16orf47Q6ZP98 133 aaPredicted RBP9.28□□□□□ -0.92
LIG1-209ENST00000596104 ACAD11Q709F0 780 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 SCUBE1Q8IWY4 988 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 PALM2Q8IXS6 379 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 CA13Q8N1Q1 262 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 TBC1D19Q8N5T2 526 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 TMEM156Q8N614 296 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 C2CD4AQ8NCU7 369 aaPredicted RBP9.28□□□□□ -0.92
LIG1-209ENST00000596104 PSD4Q8NDX1 1056 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 SLC5A11Q8WWX8 675 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 NEIL2Q969S2 332 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 FBXL8Q96CD0 374 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 LINGO1Q96FE5 620 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 PDLIM2Q96JY6 352 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 FOXC2Q99958 501 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 FAM167BQ9BTA0 163 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 DEFB127Q9H1M4 99 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 RHBGQ9H310 441 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 KLHL31Q9H511 634 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 TIMMDC1Q9NPL8 285 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 HOMER3Q9NSC5 361 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 IARS2Q9NSE4 1012 aaKnown RBP9.28□□□□□ -0.92
LIG1-209ENST00000596104 ARL15Q9NXU5 204 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 TAS2R13Q9NYV9 303 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 FBXW2Q9UKT8 454 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 MMACHCQ9Y4U1 282 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 NAV3Q8IVL0 2385 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 GTF3C1Q12789 2109 aa9.28□□□□□ -0.92
LIG1-209ENST00000596104 ABCA2Q9BZC7 2435 aa9.27□□□□□ -0.92
LIG1-209ENST00000596104 A0A0G2JMM0 328 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 A0A1W2PPB8 328 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 A0A1W2PRS3 328 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 KIR3DP1A8MWS1 328 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 NPIPA2E9PIF3 369 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 NPIPA3F8WFD2 350 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 KRT14P02533 472 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 TUBB4AP04350 444 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 HIST1H2AGP0C0S8 130 aaPredicted RBP9.27□□□□□ -0.93
LIG1-209ENST00000596104 HIST1H2ADP20671 130 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 HNF4AP41235 474 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 SSR4P51571 173 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 PGGT1BP53609 377 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 DLX5P56178 289 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 MYBPHQ13203 477 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 CSHL1Q14406 222 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 GXYLT1Q4G148 440 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 XKR6Q5GH73 641 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 TGIF2LYQ8IUE0 185 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 GPALPP1Q8IXQ4 340 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 NAT8LQ8N9F0 302 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.27□□□□□ -0.93
LIG1-209ENST00000596104 ARMC2Q8NEN0 867 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 TRPV3Q8NET8 790 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 OR2M7Q8NG81 312 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 CREB3L4Q8TEY5 395 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 NCLNQ969V3 563 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 VMP1Q96GC9 406 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 HIST1H2AHQ96KK5 128 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 TSNARE1Q96NA8 513 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 HIST1H2AJQ99878 128 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 H2AFJQ9BTM1 129 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 PNPLA3Q9NST1 481 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 KCMF1Q9P0J7 381 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 IKZF3Q9UKT9 509 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 YARS2Q9Y2Z4 477 aaKnown RBP9.27□□□□□ -0.93
LIG1-209ENST00000596104 L3MBTL1Q9Y468 752 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 FAM215AQ9Y5M1 114 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 MAD1L1Q9Y6D9 718 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 SCN3AQ9NY46 2000 aa9.27□□□□□ -0.93
LIG1-209ENST00000596104 OR14I1A6ND48 311 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 URADA6NGE7 173 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 FAM166BA8MTA8 275 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 A8MVJ9 347 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 CTAG2O75638 210 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 ZFAND5O76080 213 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 GLSO94925 669 aaPredicted RBP9.26□□□□□ -0.93
LIG1-209ENST00000596104 OR6B1O95007 311 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 ZWINTO95229 277 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 IGHG3P01860 377 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 AHSGP02765 367 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 SERPINA6P08185 405 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 GLI4P10075 376 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 ACVR2AP27037 513 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 CXCR5P32302 372 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 HNRNPFP52597 415 aaKnown RBP9.26□□□□□ -0.93
LIG1-209ENST00000596104 IL2P60568 153 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 PPIAP62937 165 aaKnown RBP9.26□□□□□ -0.93
LIG1-209ENST00000596104 FOLH1Q04609 750 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 RUNX2Q13950 521 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 CRYMQ14894 314 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 TOR1AIP1Q5JTV8 583 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 RTL6Q6ICC9 239 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms