RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 B3GALT6Q96L58 329 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CASD1Q96PB1 797 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 PIP5K1AQ99755 562 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 NCAPGQ9BPX3 1015 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 FAM49AQ9H0Q0 323 aaPredicted RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 ZBP1Q9H171 429 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 OR10A4Q9H209 315 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 SEMA6AQ9H2E6 1030 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 MUC13Q9H3R2 512 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 RABEP2Q9H5N1 569 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 PRMT8Q9NR22 394 aaPredicted RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 MBNL1Q9NR56 388 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 PXMP2Q9NR77 195 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 SEPT11Q9NVA2 429 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 PAG1Q9NWQ8 432 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 TRMT1Q9NXH9 659 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 MTRRQ9UBK8 725 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 SLC7A7Q9UM01 511 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 PCDHGB4Q9UN71 923 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 LYVE1Q9Y5Y7 322 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 PIAS3Q9Y6X2 628 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 RAD50Q92878 1312 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 ICE1Q9Y2F5 2266 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CELSR2Q9HCU4 2923 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 AHCTF1Q8WYP5 2266 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 SPAARA0A1B0GVQ0 90 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 GSTTP1A0A1W2PQM5 241 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 AGAP14A8MT82 685 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 ANHXE9PGG2 379 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 VILLO15195 856 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 SMAD9O15198 467 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 GPAA1O43292 621 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 ZBTB43O43298 467 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 HCRTR2O43614 444 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 CSDE1O75534 798 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 SLC25A12O75746 678 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 CDC123O75794 336 aaPredicted RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 BEST1O76090 585 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 CXCL14O95715 111 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 PDHBP11177 359 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 UBL4AP11441 157 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 ACSL1P33121 698 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 CA8P35219 290 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 MTHFRP42898 656 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 PTGER3P43115 390 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 MSH2P43246 934 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 TNNT3P45378 269 aaPredicted RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 CLCN4P51793 760 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 STARD6P59095 220 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 LRMPQ12912 555 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 PRPF4BQ13523 1007 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 FRG1Q14331 258 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 SMC1AQ14683 1233 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 PTPN14Q15678 1187 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 TTC31Q49AM3 519 aaPredicted RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 FASTKD1Q53R41 847 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 CYP20A1Q6UW02 462 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 TPRG1Q6ZUI0 275 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 IQCA1Q86XH1 822 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 TBC1D10CQ8IV04 446 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 CEP97Q8IW35 865 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 CEP57L1Q8IYX8 460 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 LSMEM2Q8N112 164 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 SLC39A11Q8N1S5 342 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 Q8N377 158 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 TTC39CQ8N584 583 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 MRPL43Q8N983 215 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 ITFG1Q8TB96 612 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 METTL6Q8TCB7 284 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 SGCDQ92629 289 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 CASP10Q92851 521 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 INTS12Q96CB8 462 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 OMA1Q96E52 524 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 JAKMIP1Q96N16 626 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 KLHL5Q96PQ7 755 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 GPATCH1Q9BRR8 931 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 ITPAQ9BY32 194 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 P2RY12Q9H244 342 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 ARRDC1-AS1Q9H2J1 176 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 GRPEL1Q9HAV7 217 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 OLFML3Q9NRN5 406 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 CACNG4Q9UBN1 327 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 LIMA1Q9UHB6 759 aaKnown RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 CHORDC1Q9UHD1 332 aaPredicted RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 ZNF215Q9UL58 517 aaPredicted RBP2.37□□□□□ -2.03
VAPA-208ENST00000584796 STX8Q9UNK0 236 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 TRPV2Q9Y5S1 764 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 AKAP9Q99996 3911 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 CLUHO75153 1309 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 ABCB11O95342 1321 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 NRCAMQ92823 1304 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 IGSF9BQ9UPX0 1349 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 CREBBPQ92793 2442 aa2.37□□□□□ -2.03
VAPA-208ENST00000584796 NUMA1Q14980 2115 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 MYH10P35580 1976 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ZFHX3Q15911 3703 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 MEX3AA1L020 520 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 MBLAC1A4D2B0 266 aaPredicted RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 PTGES3LE9PB15 166 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 H0Y626 953 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms