RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 LCN8Q6JVE9 175 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 PRSS55Q6UWB4 352 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 HFE2Q6ZVN8 426 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 NAGSQ8N159 534 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SLC35F5Q8WV83 523 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 AUTS2Q8WXX7 1259 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 CCDC126Q96EE4 140 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 TMEM41AQ96HV5 264 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 VAT1Q99536 393 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 ZNF670Q9BS34 389 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 DHX35Q9H5Z1 703 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 TMEM161AQ9NX61 479 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SEC14L4Q9UDX3 406 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 EGFL7Q9UHF1 273 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 DCDC2Q9UHG0 476 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 FBXL21Q9UKT6 434 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SSR3Q9UNL2 185 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 RUVBL2Q9Y230 463 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 CRYL1Q9Y2S2 319 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 AGRPO00253 132 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 KIAA0355O15063 1070 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 CREG1O75629 220 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 ANXA6P08133 673 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 NR2C1P13056 603 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SPI1P17947 270 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SPRP35270 261 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 RFC3P40938 356 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SLC1A3P43003 542 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 PGFP49763 221 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 XKP51811 444 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SESN2P58004 480 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 HNRNPKP61978 463 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 IL18R1Q13478 541 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 RBMS2Q15434 407 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 CYP51A1Q16850 503 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 HEATR6Q6AI08 1181 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 CES3Q6UWW8 571 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 RSPO2Q6UXX9 243 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SCAMP5Q8TAC9 235 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 PHOSPHO1Q8TCT1 267 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 DTD1Q8TEA8 209 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 RNF145Q96MT1 663 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 DNTTIP1Q9H147 329 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 ACOT13Q9NPJ3 140 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 REV3LO60673 3130 aa11.44□□□□□ -0.58
CDK5RAP3-232ENST00000584168 PER2O15055 1255 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 EOMESO95936 686 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 MT-ND2P03891 347 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 CHRM3P20309 590 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 MPSTP25325 297 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 MAZP56270 477 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 ISL1P61371 349 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SEMA5AQ13591 1074 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 TIGD6Q17RP2 521 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 PKDCCQ504Y2 493 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 ELP2Q6IA86 826 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SPRED2Q7Z698 418 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SCN4BQ8IWT1 228 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 GHDCQ8N2G8 530 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 PGBD3Q8N328 593 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 TOP6BLQ8N6T0 577 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 NANOGP1Q8N7R0 232 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 C2CD4CQ8TF44 421 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SNX33Q8WV41 574 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.587e-8■■□□□ 13.1
CDK5RAP3-232ENST00000584168 SMOQ99835 787 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 GPR61Q9BZJ8 451 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 FAM117AQ9C073 453 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SUV39H2Q9H5I1 410 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 ZNF358Q9NW07 568 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 RALGAPA2Q2PPJ7 1873 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 TDRD15B5MCY1 1934 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 IFRD1O00458 451 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 PDCD5O14737 125 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 GABRDO14764 452 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 MRASO14807 208 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 MDM4O15151 490 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 H2AFYO75367 372 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 C9P02748 559 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 MT-ND1P03886 318 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 PRKCGP05129 697 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 USP17L7P0C7H9 530 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 GADD45AP24522 165 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 CDH13P55290 713 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 UBE2IP63279 158 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SERTAD2Q14140 314 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SYT16Q17RD7 645 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SLC39A12Q504Y0 691 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 ACER2Q5QJU3 275 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 FAM45BPQ6NSW5 357 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 CLEC20AQ6ZU45 233 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 CYS1Q717R9 158 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 FAM45AQ8TCE6 357 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 EDEM1Q92611 657 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 FEM1AQ9BSK4 669 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 SOX7Q9BT81 388 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 FTHL17Q9BXU8 183 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 GSDMCQ9BYG8 508 aa11.43□□□□□ -0.58
CDK5RAP3-232ENST00000584168 DYRK4Q9NR20 520 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms