RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 LIPJQ5W064 366 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 WDR93Q6P2C0 686 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 TMEM205Q6UW68 189 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 ATG14Q6ZNE5 492 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 KBTBD2Q8IY47 623 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 LAS2Q8IYD9 372 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 CA13Q8N1Q1 262 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 ZNF473Q8WTR7 871 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 MZB1Q8WU39 189 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 REPS1Q96D71 796 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 SMAD5Q99717 465 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 MS4A8Q9BY19 250 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 LHPPQ9H008 270 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 ZNF700Q9H0M5 742 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 ZNF552Q9H707 407 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 CLK4Q9HAZ1 481 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 LANCL2Q9NS86 450 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 PCTPQ9UKL6 214 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 PCDHGA11Q9Y5H2 935 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 CFAP46Q8IYW2 2715 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 TLDC2A0PJX2 215 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 FOXO6A8MYZ6 492 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 OR7A17O14581 309 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 UGDHO60701 494 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 DPM1O60762 260 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 SEC24DO94855 1032 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 CLDN9O95484 217 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 TBX6O95947 436 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 GSTA1P08263 222 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 SBK3P0C264 359 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 PLA2G2AP14555 144 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 CERS1P27544 350 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 MTTPP55157 894 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 SOX8P57073 446 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 RHAGQ02094 409 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 IFFO1Q0D2I5 559 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 Q0VFX4 171 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 RUNX2Q13950 521 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 PCOLCEQ15113 449 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 NSDHLQ15738 373 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 ADPRMQ3LIE5 342 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 TMEM35AQ53FP2 167 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 ABHD17CQ6PCB6 329 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 EMBQ6PCB8 327 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 CHSY3Q70JA7 882 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 RPS27LQ71UM5 84 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 CPEB2Q7Z5Q1 589 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 ANKRD37Q7Z713 158 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 TDRPQ86YL5 185 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 CYP4X1Q8N118 509 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 RNF175Q8N4F7 328 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 TMEM151AQ8N4L1 468 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 SRFBP1Q8NEF9 429 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 OR52B6Q8NGF0 335 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 OR2W6PQ8NHA6 318 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 HUS1BQ8NHY5 278 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 AENQ8WTP8 325 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 TSLPQ969D9 159 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 CMTM7Q96FZ5 175 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 NSUN5Q96P11 429 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 KCNC2Q96PR1 638 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 CDK15Q96Q40 435 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 SERINC2Q96SA4 455 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 MTERF1Q99551 399 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 MFRPQ9BY79 579 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 TRIM4Q9C037 500 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 OR51B5Q9H339 312 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 SEMA4BQ9NPR2 832 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 DMRT3Q9NQL9 472 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 C5AR2Q9P296 337 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 DCDC2Q9UHG0 476 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 ADGRE2Q9UHX3 823 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 RNF11Q9Y3C5 154 aa11.87□□□□□ -0.51
SMARCE1-218ENST00000582955 A0A1W2PQ72 361 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 MAGEB17A8MXT2 336 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 FAM227AF5H4B4 570 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 H0YIV9 168 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 SAP18O00422 153 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 RTCAO00442 366 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 PRMT3O60678 531 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 CDH16O75309 829 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 GLRA3O75311 464 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 RPS17P08708 135 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 TSPAN8P19075 237 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 ATP5F1P24539 256 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 PIK3CBP42338 1070 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 SSR2P43308 183 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 RAP1GDS1P52306 607 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 BTG2P78543 158 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 ACTN3Q08043 901 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 ZRSR2Q15696 482 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 NADK2Q4G0N4 442 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 SFT2D3Q587I9 215 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 AGAP7PQ5VUJ5 663 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 KHDRBS2Q5VWX1 349 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 TTC19Q6DKK2 380 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 HPS6Q86YV9 775 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 L3MBTL4Q8NA19 623 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 FAM47BQ8NA70 645 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 PLPP5Q8NEB5 264 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms