RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ZNF740Q8NDX6 193 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 FAM46DQ8NEK8 389 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 ADCY4Q8NFM4 1077 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 OR4K1Q8NGD4 311 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 OR10G6Q8NH81 332 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 NAF1Q96HR8 494 aaKnown RBP8.88□□□□□ -0.99
SS18-220ENST00000582092 F2RL3Q96RI0 385 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 DPH7Q9BTV6 452 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 TBCDQ9BTW9 1192 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 FAIM2Q9BWQ8 316 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 BHLHE41Q9C0J9 482 aaPredicted RBP8.88□□□□□ -0.99
SS18-220ENST00000582092 MYNNQ9NPC7 610 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 DNAAF2Q9NVR5 837 aaKnown RBP8.88□□□□□ -0.99
SS18-220ENST00000582092 TAAR2Q9P1P5 351 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 BTNL2Q9UIR0 455 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 PCOLCE2Q9UKZ9 415 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 BAG5Q9UL15 447 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 ICKQ9UPZ9 632 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 MAN2B2Q9Y2E5 1009 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 PCDHB14Q9Y5E9 798 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 SPTBN2O15020 2390 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 TDRD6O60522 2096 aaKnown RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 SPTY2D1-AS1A0A0U1RR47 76 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 TCRBV3S1A0A5B6 114 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 OR6C74A6NCV1 312 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 CLIC1O00299 241 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 TXNDC9O14530 226 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 GNGT2O14610 69 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 YKT6O15498 198 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 FKBP9O95302 570 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 ETHE1O95571 254 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 GBAP04062 536 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 IGHV4-34P06331 123 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 ABCB1P08183 1280 aaPredicted RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 ADRB1P08588 477 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 LAMP1P11279 417 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 NCK1P16333 377 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 JUNDP17535 347 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 ATP6V1C1P21283 382 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 AHRP35869 848 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 CHI3L1P36222 383 aaPredicted RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 CSNK1EP49674 416 aaKnown RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 HNRNPFP52597 415 aaKnown RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 RPS15AP62244 130 aaKnown RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 RAE1P78406 368 aaKnown RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 ABHD18Q0P651 414 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 ELOCQ15369 112 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 UGT8Q16880 541 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 LPCAT4Q643R3 524 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 OR4C11Q6IEV9 310 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 TRIM40Q6P9F5 258 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 IYDQ6PHW0 289 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 PARGQ86W56 976 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 PTRH1Q86Y79 214 aaKnown RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 RBM12BQ8IXT5 1001 aaKnown RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 MICU2Q8IYU8 434 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 ZNF655Q8N720 491 aaPredicted RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 MFSD2AQ8NA29 543 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 LINC01555Q8NAE3 123 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 OR2L3Q8NG85 312 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 OR2A1Q8NGT9 310 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 CCL4L1Q8NHW4 92 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 WDR48Q8TAF3 677 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 GPBAR1Q8TDU6 330 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 CANT1Q8WVQ1 401 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 JPH3Q8WXH2 748 aaPredicted RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 RNF145Q96MT1 663 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 INPP5KQ9BT40 448 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 MS4A8Q9BY19 250 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 ASPSCR1Q9BZE9 553 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 TRIM8Q9BZR9 551 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 PAIP1Q9H074 479 aaKnown RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 SPNS1Q9H2V7 528 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 GAREM1Q9H706 876 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 TM9SF3Q9HD45 589 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 CCM2LQ9NUG4 571 aaPredicted RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 GIMAP4Q9NUV9 329 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 VAPAQ9P0L0 249 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 SCHIP1Q9P0W5 487 aaPredicted RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 ZNF282Q9UDV7 671 aaPredicted RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 APOBEC3BQ9UH17 382 aaKnown RBP8.87□□□□□ -0.99
SS18-220ENST00000582092 ATP6V1HQ9UI12 483 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 ADAM29Q9UKF5 820 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 ENTPD2Q9Y5L3 495 aa8.87□□□□□ -0.99
SS18-220ENST00000582092 WDR87Q6ZQQ6 2873 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 A0A1B0GVT2 93 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 A0A1W2PPV9 198 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 A0A1W2PRB8 838 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 MED19A0JLT2 244 aaPredicted RBP8.86□□□□□ -0.99
SS18-220ENST00000582092 C2orf74A8MZ97 194 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 FAM220BPB1ANY3 271 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 H3BNX3 289 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 CXCR6O00574 342 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 RNASET2O00584 256 aaKnown RBP8.86□□□□□ -0.99
SS18-220ENST00000582092 VILLO15195 856 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 KRT75O95678 551 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 IL3P08700 152 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 POLR2CP19387 275 aaPredicted RBP8.86□□□□□ -0.99
SS18-220ENST00000582092 GGT1P19440 569 aa8.86□□□□□ -0.99
SS18-220ENST00000582092 ZNF10P21506 573 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms