RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 LMO7DNF2Z398 122 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 PSMA7O14818 248 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 INPP4BO15327 924 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 SUPT20HL2P0C7V6 817 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 PCP11498 1178 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 GATA2P23769 480 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 SRD5A2P31213 254 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 IER3P46695 156 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 CLCN4P51793 760 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 FCHO2Q0JRZ9 810 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 CNTN1Q12860 1018 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 COX10Q12887 443 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 GCKRQ14397 625 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 UPP1Q16831 310 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 IQCCQ4KMZ1 466 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 HECTD3Q5T447 861 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 PM20D1Q6GTS8 502 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 RFPL4BQ6ZWI9 263 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 HOOK3Q86VS8 718 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 AMER3Q8N944 861 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 ATAD1Q8NBU5 361 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 C17orf47Q8NEP4 570 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 SPPL2AQ8TCT8 520 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 ZNF597Q96LX8 424 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 C17orf62Q9BQA9 187 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 MLPHQ9BV36 600 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 RAB11FIP5Q9BXF6 653 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 IDI2Q9BXS1 227 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 FNDC4Q9H6D8 234 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 HEXA-AS1Q9H8Q6 139 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 KCNK13Q9HB14 408 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 IL1RAPQ9NPH3 570 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 RPS10P5Q9NQ39 176 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 PILRAQ9UKJ1 303 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 CSAG2Q9Y5P2 127 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 SMAD5-AS1Q9Y6J3 95 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 GRAP2O75791 330 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 ADORA3P0DMS8 318 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 GLULP15104 373 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 FKBP1BP68106 108 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 ROR1Q01973 937 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 AKAP17AQ02040 695 aaKnown RBP3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 MLF2Q15773 248 aaPredicted RBP3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 TCTEX1D4Q5JR98 221 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 PODNL1Q6PEZ8 512 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 P2RY8Q86VZ1 359 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 RNF130Q86XS8 419 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 TUSC5Q8IXB3 177 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 OR4N5Q8IXE1 308 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 TMEM99Q8N816 258 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 CD99L2Q8TCZ2 262 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 SMPDL3AQ92484 453 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 SEPT8Q92599 483 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 BPIFA2Q96DR5 249 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 ATF6BQ99941 703 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 ZNF577Q9BSK1 485 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 SRD5A3Q9H8P0 318 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 TUFT1Q9NNX1 390 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 SH3GLB2Q9NR46 395 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 GTSE1Q9NYZ3 720 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 TMED7Q9Y3B3 224 aa3.69□□□□□ -1.82
SMCHD1-204ENST00000581226 CCDC162PA2VCL2 907 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 ACOD1A6NK06 481 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 SDR42E2A6NKP2 422 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 SHISA7A6NL88 538 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 A8MU76 341 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 RAD51DO75771 328 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 ETV5P41161 510 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 PGFP49763 221 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 NDUFV3P56181 108 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 EVCP57679 992 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 ABCE1P61221 599 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 CEACAM7Q14002 265 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 CCDC158Q5M9N0 1113 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 ZNF841Q6ZN19 808 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 GBP6Q6ZN66 633 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 SLC47A2Q86VL8 602 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 SLC43A2Q8N370 569 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 OR13C5Q8NGS8 318 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 SAP25Q8TEE9 199 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 SLC35C1Q96A29 364 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 RFT1Q96AA3 541 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 DCTN5Q9BTE1 182 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 SLC39A8Q9C0K1 460 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 CUEDC2Q9H467 287 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 TMEM206Q9H813 350 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 GNB4Q9HAV0 340 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 GPR173Q9NS66 373 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 TMEM161AQ9NX61 479 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 FBXL5Q9UKA1 691 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 PCNX3Q9H6A9 2034 aa3.68□□□□□ -1.82
SMCHD1-204ENST00000581226 A0A1W2PRQ8 180 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 ARHGEF33A8MVX0 844 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 PDHXO00330 501 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 ZNF749O43361 778 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 CLN5O75503 358 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 ANGPTL1O95841 491 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 CD1DP15813 335 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms