RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 GUCY1B2O75343 617 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 FTH1P19P0C7X4 201 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 SDHBP21912 280 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 ATP5A1P25705 553 aaKnown RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 TPP2P29144 1249 aaPredicted RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 TSPAN7P41732 249 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 EIF3IQ13347 325 aaKnown RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 ISXQ2M1V0 245 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 IKBIPQ70UQ0 350 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 TRPM8Q7Z2W7 1104 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 ACOT4Q8N9L9 421 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 STARD8Q92502 1023 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 ERP27Q96DN0 273 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 MVB12AQ96EY5 273 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 LIN37Q96GY3 246 aaPredicted RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 MARK4Q96L34 752 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 TEFMQ96QE5 360 aaKnown RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 OR6C1Q96RD1 312 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 NPLQ9BXD5 320 aaPredicted RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 EBPLQ9BY08 206 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 SPRTNQ9H040 489 aaPredicted RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 LHX9Q9NQ69 397 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 STARD5Q9NSY2 213 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 LYARQ9NX58 379 aaKnown RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 CDV3Q9UKY7 258 aaKnown RBP10.2□□□□□ -0.78
SS18-213ENST00000579640 SRPK3Q9UPE1 567 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 CAPN7Q9Y6W3 813 aa10.2□□□□□ -0.78
SS18-213ENST00000579640 ZFHX2Q9C0A1 2572 aaPredicted RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 C4orf51C9J302 202 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 PSMD12O00232 456 aaPredicted RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 B3GALT2O43825 422 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 GALR3O60755 368 aaPredicted RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 CSO75390 466 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 EEDO75530 441 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 NSA2O95478 260 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 CTSBP07858 339 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 FGF5P12034 268 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 JAK1P23458 1154 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 RPL3P39023 403 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 GCGRP47871 477 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 AVPR1BP47901 424 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 MAPK12P53778 367 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 CLNS1AP54105 237 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 CLDN8P56748 225 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 C21orf58P58505 322 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 BTN3A2P78410 334 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 SIM1P81133 766 aaPredicted RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 MC2RQ01718 297 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 FOXM1Q08050 763 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 KLF10Q13118 480 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 UBAP2LQ14157 1087 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 SLC9A5Q14940 896 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 DEFB134Q4QY38 66 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 DHRS13Q6UX07 377 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 ZNF793Q6ZN11 406 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 CLNKQ7Z7G1 428 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 SLCO6A1Q86UG4 719 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 PPP1R3BQ86XI6 285 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 BMPERQ8N8U9 685 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 GLB1L3Q8NCI6 653 aaPredicted RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 C10orf90Q96M02 699 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 ZBTB18Q99592 522 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 NDC1Q9BTX1 674 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 CCDC106Q9BWC9 280 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 SORBS1Q9BX66 1292 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 DPY30Q9C005 99 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 MYNNQ9NPC7 610 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 FBXO8Q9NRD0 319 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 CUTCQ9NTM9 273 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 RAPGEFL1Q9UHV5 662 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 CLCA2Q9UQC9 943 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 FRYLO94915 3013 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 PTPRZ1P23471 2315 aaPredicted RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 A0A0G2JN53 185 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 SPAARA0A1B0GVQ0 90 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 CCT8L1PA6NM43 557 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 H0YIG0 161 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 EBAG9O00559 213 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 ANKRD28O15084 1053 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 SLC22A3O75751 556 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 KLHL18O94889 574 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 HBQ1P09105 142 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 DDX5P17844 614 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 PRPS1L1P21108 318 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 GPX3P22352 226 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 CERS1P27544 350 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 NOVA1P51513 510 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 PTGR1Q14914 329 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 MAPRE2Q15555 327 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.19□□□□□ -0.78
SS18-213ENST00000579640 HES3Q5TGS1 186 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 MRM1Q6IN84 353 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 TMEM132CQ8N3T6 1108 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 FITM2Q8N6M3 262 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.19□□□□□ -0.782e-14■■□□□ 11.4
SS18-213ENST00000579640 C16orf78Q8WTQ4 265 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 TSSK3Q96PN8 268 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 LYRM4Q9HD34 91 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 OCIAD1Q9NX40 245 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 MS4A12Q9NXJ0 267 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms