RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 BRIX1Q8TDN6 353 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 PPP4R1Q8TF05 950 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 PSMF1Q92530 271 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 PEX13Q92968 403 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 MMABQ96EY8 250 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 CABS1Q96KC9 395 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 C5orf34Q96MH7 638 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 FOPNLQ96NB1 174 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 MACROD1Q9BQ69 325 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 RAB11FIP5Q9BXF6 653 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 TSGA10Q9BZW7 698 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 MRM3Q9HC36 420 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 MRPS30Q9NP92 439 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 FBXO6Q9NRD1 293 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 SPATA7Q9P0W8 599 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 PTGFRNQ9P2B2 879 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 TRPC4Q9UBN4 977 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 ZNF282Q9UDV7 671 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 TAC3Q9UHF0 121 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 PCYOX1Q9UHG3 505 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 NXT1Q9UKK6 140 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 RUVBL1Q9Y265 456 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 MED16Q9Y2X0 877 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 KLK4Q9Y5K2 254 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 FAM169AQ9Y6X4 670 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 ESPL1Q14674 2120 aa5.9□□□□□ -1.47
NUP88-212ENST00000576708 SEC16AO15027 2179 aa5.9□□□□□ -1.47
NUP88-212ENST00000576708 NUP210LQ5VU65 1888 aa5.9□□□□□ -1.47
NUP88-212ENST00000576708 CROCCQ5TZA2 2017 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 NSG1A0A0A6YYJ2 146 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 IGHV3-20A0A0C4DH32 117 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 OR2W5A6NFC9 320 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 IDSB3KWA1 339 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 E5RI56 91 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 E7ENX8 843 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 MYO1CO00159 1063 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 HAT1O14929 419 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 FOXS1O43638 330 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 KLHL41O60662 606 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 ZG16O60844 167 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 PSIP1O75475 530 aaKnown RBP5.89□□□□□ -1.47
NUP88-212ENST00000576708 WISP2O76076 250 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 USP1O94782 785 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 SLC16A8O95907 504 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 HPP00738 406 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 KRT14P02533 472 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 PRR35P0CG20 571 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 ERVK-10P10266 1014 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 ERGP11308 486 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 COX6A1P12074 109 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 TPSB2P20231 275 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 CARSP49589 748 aaKnown RBP5.89□□□□□ -1.47
NUP88-212ENST00000576708 KCNK10P57789 538 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 MPP1Q00013 466 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 TAP2Q03519 686 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 GPS1Q13098 491 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 MFAP5Q13361 173 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 DHX34Q14147 1143 aaKnown RBP5.89□□□□□ -1.47
NUP88-212ENST00000576708 TPSAB1Q15661 275 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 MUM1Q2TAK8 710 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 IRAK1BP1Q5VVH5 260 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 C1QL3Q5VWW1 255 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 ICE2Q659A1 982 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 ATG9BQ674R7 924 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 KIAA0930Q6ICG6 404 aaPredicted RBP5.89□□□□□ -1.47
NUP88-212ENST00000576708 ZNF425Q6IV72 752 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 NEPROQ6NW34 567 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 PRMT9Q6P2P2 845 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 CASC4Q6P4E1 433 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 CYHR1Q6ZMK1 362 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 ETV3LQ6ZN32 361 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 UBE2R2Q712K3 238 aaPredicted RBP5.89□□□□□ -1.47
NUP88-212ENST00000576708 PRSS41Q7RTY9 318 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 PIWIL4Q7Z3Z4 852 aaKnown RBP5.89□□□□□ -1.47
NUP88-212ENST00000576708 ADCK2Q7Z695 626 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.89□□□□□ -1.47
NUP88-212ENST00000576708 STK32CQ86UX6 486 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 CILP2Q8IUL8 1156 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 REXO1L1PQ8IX06 675 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 KBTBD2Q8IY47 623 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 LRRC56Q8IYG6 542 aaPredicted RBP5.89□□□□□ -1.47
NUP88-212ENST00000576708 CPNE9Q8IYJ1 553 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 RAB42Q8N4Z0 105 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 AMER3Q8N944 861 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 ST6GALNAC3Q8NDV1 305 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 PHOSPHO1Q8TCT1 267 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 MAGEC3Q8TD91 643 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 ZNF480Q8WV37 535 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 FAR1Q8WVX9 515 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 SMPDL3AQ92484 453 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 MS4A14Q96JA4 679 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 CCDC138Q96M89 665 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 OR2A5Q96R48 311 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 TAAR6Q96RI8 345 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 EPS8L2Q9H6S3 715 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 AGPAT4Q9NRZ5 378 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 SH2B3Q9UQQ2 575 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 TEX15Q9BXT5 2789 aa5.89□□□□□ -1.47
NUP88-212ENST00000576708 PCM1Q15154 2024 aa5.88□□□□□ -1.47
NUP88-212ENST00000576708 ANKRD12Q6UB98 2062 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms