RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 CCDC89Q8N998 374 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 GIMAP7Q8NHV1 300 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 FAM222BQ8WU58 562 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 NCLNQ969V3 563 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 ARSGQ96EG1 525 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 LRRC46Q96FV0 321 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 TCF12Q99081 682 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 IL22Q9GZX6 179 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 PCBD2Q9H0N5 130 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 CCDC68Q9H2F9 335 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 ZDHHC11Q9H8X9 412 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 PRDM9Q9NQV7 894 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 SAMD15Q9P1V8 674 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 YARS2Q9Y2Z4 477 aaKnown RBP11.33□□□□□ -0.6
PRPF8-208ENST00000573716 TCRBV16S1A1N1A0A5B0 115 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 GRID2IPA4D2P6 1211 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 CTAGE9A4FU28 777 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 FAM47E-STBD1D6RA91 191 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 WDR1O75083 606 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 OR6B1O95007 311 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 CELA3AP09093 270 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 ZSCAN5DPP0CG00 497 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 MPC1LP0DKB6 136 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 RNH1P13489 461 aaKnown RBP11.32□□□□□ -0.6
PRPF8-208ENST00000573716 BMP5P22003 454 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 TACR1P25103 407 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 ANP32AP39687 249 aaKnown RBP11.32□□□□□ -0.6
PRPF8-208ENST00000573716 PEX19P40855 299 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 SKIV2L2P42285 1042 aaKnown RBP11.32□□□□□ -0.6
PRPF8-208ENST00000573716 NPY2RP49146 381 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 RAB8AP61006 207 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 NKX6-1P78426 367 aaPredicted RBP11.32□□□□□ -0.6
PRPF8-208ENST00000573716 RGS1Q08116 209 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 NAE1Q13564 534 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 PCBP2Q15366 365 aaKnown RBP eCLIP11.32□□□□□ -0.6
PRPF8-208ENST00000573716 RPS6KA1Q15418 735 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 ZNF750Q32MQ0 723 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 RGS9BPQ6ZS82 235 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 GK5Q6ZS86 529 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 ABHD13Q7L211 337 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 ARMC10Q8N2F6 343 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 FAM109AQ8N4B1 249 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 AFAP1L2Q8N4X5 818 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 TMEM251Q8N6I4 163 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 APCDD1LQ8NCL9 501 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 C1orf54Q8WWF1 131 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 VMP1Q96GC9 406 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 PDLIM2Q96JY6 352 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 SARGQ9BW04 601 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 FAM129AQ9BZQ8 928 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 SYBUQ9NX95 663 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 ZFATQ9P243 1243 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 B4GALT7Q9UBV7 327 aa11.32□□□□□ -0.6
PRPF8-208ENST00000573716 FAM171A2A8MVW0 826 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 GFYI3L273 518 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 WWP2O00308 870 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 SYT5O00445 386 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 SMAD7O15105 426 aaKnown RBP11.31□□□□□ -0.6
PRPF8-208ENST00000573716 LIASO43766 372 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 PRKNO60260 465 aaPredicted RBP11.31□□□□□ -0.6
PRPF8-208ENST00000573716 AVILO75366 819 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 ZFAND5O76080 213 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 FTCDO95954 541 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 OGNP20774 298 aaKnown RBP11.31□□□□□ -0.6
PRPF8-208ENST00000573716 PPP2R1BP30154 601 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 HOXC12P31275 282 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 SOX3P41225 446 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 ASCL1P50553 236 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 CCR8P51685 355 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 TERF1P54274 439 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 DCAF7P61962 342 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 BASP1P80723 227 aaKnown RBP11.31□□□□□ -0.6
PRPF8-208ENST00000573716 XKR6Q5GH73 641 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 RIPPLY2Q5TAB7 128 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 NDUFAF5Q5TEU4 345 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 AGTRAPQ6RW13 159 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 FAM47EQ6ZV65 393 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 CENPUQ71F23 418 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 CXXC5Q7LFL8 322 aaKnown RBP11.31□□□□□ -0.6
PRPF8-208ENST00000573716 CPNE9Q8IYJ1 553 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 CCDC170Q8IYT3 715 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 TBC1D19Q8N5T2 526 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 LRRC57Q8N9N7 239 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 SARAFQ96BY9 339 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 CALR3Q96L12 384 aaKnown RBP11.31□□□□□ -0.6
PRPF8-208ENST00000573716 GPR21Q99679 349 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 FAM173AQ9BQD7 235 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 PAK5Q9P286 719 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 ZNF223Q9UK11 482 aaPredicted RBP11.31□□□□□ -0.6
PRPF8-208ENST00000573716 VPS9D1Q9Y2B5 631 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 COL6A5A8TX70 2615 aa11.31□□□□□ -0.6
PRPF8-208ENST00000573716 IGKV3D-11A0A0A0MRZ8 115 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 HSPB2A8KAH6 182 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 AQP7O14520 342 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 DVL2O14641 736 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 IPO7O95373 1038 aaKnown RBP11.3□□□□□ -0.6
PRPF8-208ENST00000573716 IGHG3P01860 377 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 ENO3P13929 434 aaPredicted RBP11.3□□□□□ -0.6
PRPF8-208ENST00000573716 RPL22P35268 128 aaKnown RBP11.3□□□□□ -0.6
PRPF8-208ENST00000573716 DNASE1L1P49184 302 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms