RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 TMEM79Q9BSE2 394 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 CDCP1Q9H5V8 836 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 PRDM9Q9NQV7 894 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 GPRC5BQ9NZH0 403 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 SEC14L3Q9UDX4 400 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 MRPS33Q9Y291 106 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 EML6Q6ZMW3 1958 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 TEX15Q9BXT5 2789 aa9.06□□□□□ -0.96
NPLOC4-212ENST00000573328 UNC79Q9P2D8 2635 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 CELSR2Q9HCU4 2923 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 A0A1B0GUH1 482 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 SAGE2PA6NJ88 616 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 FCHO1O14526 889 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 B3GALT2O43825 422 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 ZG16O60844 167 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 STK16O75716 305 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 FAM155BO75949 473 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 MLYCDO95822 493 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 GSTM2P28161 218 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 HNRNPH1P31943 449 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 MAGEA4P43358 317 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 PLA2G16P53816 162 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 GPX6P59796 221 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 ETF1P62495 437 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 CKAP4Q07065 602 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 HYAL2Q12891 473 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 SLC13A2Q13183 592 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 OR4D1Q15615 310 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 UAP1Q16222 522 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 PDK4Q16654 411 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 HIST2H2ACQ16777 129 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 GRTP1Q5TC63 336 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 ZNF324BQ6AW86 544 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 ZNF787Q6DD87 383 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 HIST2H2AA3Q6FI13 130 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 H3F3CQ6NXT2 135 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 C8orf74Q6P047 294 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 SLCO4C1Q6ZQN7 724 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 CMC1Q7Z7K0 106 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 RPS19BP1Q86WX3 136 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 KLHDC8AQ8IYD2 350 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 KIF2BQ8N4N8 673 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 FAM47BQ8NA70 645 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 FBF1Q8TES7 1133 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 CREB3L4Q8TEY5 395 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 MRRFQ96E11 262 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 PTCD3Q96EY7 689 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 MCMBPQ9BTE3 642 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 HES7Q9BYE0 225 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 DEFB126Q9BYW3 111 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 PHACTR1Q9C0D0 580 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 REXO4Q9GZR2 422 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 ALG9Q9H6U8 611 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 CLK4Q9HAZ1 481 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 NECTIN3Q9NQS3 549 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 PNO1Q9NRX1 252 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 LRFN1Q9P244 771 aa9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 SUCOQ9UBS9 1254 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-212ENST00000573328 TRBV11-1A0A0K0K1C0 115 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 TCRBV16S1A1N1A0A5B0 115 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 WIPF3A6NGB9 483 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 CLDN4O14493 209 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 TAPBPO15533 448 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 MAN1A2O60476 641 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 CLEC3AO75596 197 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 MYO1DO94832 1006 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 WISP3O95389 354 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 STSP08842 583 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 SMIM10L1P0DMW3 83 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 PCNAP12004 261 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 TFEBP19484 476 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 MST1P26927 711 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 CERS1P27544 350 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 TPP2P29144 1249 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 GMPRP36959 345 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 CD96P40200 585 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 CASP6P55212 293 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 RAB38P57729 211 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 ALDH6A1Q02252 535 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 IRF8Q02556 426 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 TGM3Q08188 693 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 CBLBQ13191 982 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 NAB1Q13506 487 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 RCN2Q14257 317 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 EFTUD2Q15029 972 aaKnown RBP eCLIP9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 ZKSCAN8Q15776 578 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 MAPKAPK3Q16644 382 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 PAGE2BQ5JRK9 111 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 SPINK14Q6IE38 97 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 LRRC70Q7Z2Q7 622 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 GALNTL5Q7Z4T8 443 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 CLNKQ7Z7G1 428 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 PDPRQ8NCN5 879 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 MDS2Q8NDY4 140 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 OR2L5Q8NG80 312 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 STAG3L4Q8TBR4 150 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 ELP5Q8TE02 316 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 ADAMTS18Q8TE60 1221 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 THAP3Q8WTV1 239 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 KIAA1191Q96A73 305 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms