RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CASC3O15234 703 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 B3GALT2O43825 422 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 LCMT2O60294 686 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRAMEF10O60809 474 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 CPNE3O75131 537 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 SCRG1O75711 98 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 HBQ1P09105 142 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ANXA4P09525 319 aaPredicted RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 MSL3P1P0C860 447 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 FOLR1P15328 257 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ALOX12P18054 663 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 IL1RNP18510 177 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRPH2P23942 346 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 CERS1P27544 350 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 HNRNPH1P31943 449 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 HPCAL1P37235 193 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 BUD31P41223 144 aaPredicted RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 GSTM5P46439 218 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ASMTP46597 345 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 PDX1P52945 283 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ARFIP1P53367 373 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 MAPK10P53779 464 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ARSFP54793 590 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 MTTPP55157 894 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 RAB8AP61006 207 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 BTN3A2P78410 334 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 IRX1P78414 480 aaPredicted RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZFP36L1Q07352 338 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF763Q0D2J5 394 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 SQLEQ14534 574 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 SLC9A5Q14940 896 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 C16orf72Q14CZ0 275 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 RSPO4Q2I0M5 234 aaPredicted RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ISXQ2M1V0 245 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 SMU1Q2TAY7 513 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAM214AQ32MH5 1076 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 C11orf91Q3C1V1 193 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 LSM12Q3MHD2 195 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 DEFB134Q4QY38 66 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 C3orf38Q5JPI3 329 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 CCNYL2Q5T2Q4 361 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 DEPDC1Q5TB30 811 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 SAMD5Q5TGI4 173 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 YOD1Q5VVQ6 348 aaPredicted RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 GARNL3Q5VVW2 1013 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAM219BQ5XKK7 198 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 OGFOD2Q6N063 350 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 CEACAM20Q6UY09 585 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF574Q6ZN55 896 aaPredicted RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 RAB11FIP2Q7L804 512 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 VN1R5Q7Z5H4 357 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 GALNT15Q8N3T1 639 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 KCT2Q8NC54 265 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 OR2T11Q8NH01 316 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 OR1L3Q8NH93 324 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ADAMTS18Q8TE60 1221 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 CREB3L4Q8TEY5 395 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 MS4A6EQ96DS6 147 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 CLIP3Q96DZ5 547 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAM122AQ96E09 287 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 MAELQ96JY0 434 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 MARK4Q96L34 752 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 C3orf30Q96M34 536 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 CATSPER2Q96P56 530 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 OR52B2Q96RD2 323 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 F2RL3Q96RI0 385 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 SERINC2Q96SA4 455 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 MACROD1Q9BQ69 325 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAIM2Q9BWQ8 316 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 EBPLQ9BY08 206 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 AKTIPQ9H8T0 292 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 WDR41Q9HAD4 459 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 MIEF1Q9NQG6 463 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 STARD5Q9NSY2 213 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 CUTCQ9NTM9 273 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 LYARQ9NX58 379 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 SLC39A1Q9NY26 324 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 SEMA5BQ9P283 1151 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 PDP2Q9P2J9 529 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 GIMAP2Q9UG22 337 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 PISDQ9UG56 409 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 PHF11Q9UIL8 331 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 ADAM29Q9UKF5 820 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 G3BP2Q9UN86 482 aaKnown RBP6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 DOCK9Q9BZ29 2069 aa6.26□□□□□ -1.41
CTDNEP1-204ENST00000570484 A0A1B0GX78 115 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 HYKKA2RU49 373 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF860A6NHJ4 632 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 B4E171 279 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 NPIPB8E9PQR5 432 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 RTCAO00442 366 aaKnown RBP6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 PLPP1O14494 284 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 PLD2O14939 933 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 KLHL18O94889 574 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 KCNK5O95279 499 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ETHE1O95571 254 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 KLK1P06870 262 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRPS2P11908 318 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 ACPPP15309 386 aa6.25□□□□□ -1.41
CTDNEP1-204ENST00000570484 PCSK2P16519 638 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms