RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	SPNS1	Q9H2V7	528 aa		10.25	□□□□□ -0.77
CMC2-223	ENST00000570195	LIN28A	Q9H9Z2	209 aa	Known RBP	10.25	□□□□□ -0.77
CMC2-223	ENST00000570195	PARVB	Q9HBI1	364 aa		10.25	□□□□□ -0.77
CMC2-223	ENST00000570195	PRDM9	Q9NQV7	894 aa		10.25	□□□□□ -0.77
CMC2-223	ENST00000570195	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.25	□□□□□ -0.77
CMC2-223	ENST00000570195	ZFAT	Q9P243	1243 aa		10.25	□□□□□ -0.77
CMC2-223	ENST00000570195	ZNF223	Q9UK11	482 aa	Predicted RBP	10.25	□□□□□ -0.77
CMC2-223	ENST00000570195	ERVK-11	Q9UQG0	969 aa		10.25	□□□□□ -0.77
CMC2-223	ENST00000570195	LIPG	Q9Y5X9	500 aa		10.25	□□□□□ -0.77
CMC2-223	ENST00000570195	MAP1A	P78559	2803 aa	Predicted RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195		A0A0G2JMM0	328 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195		A0A1W2PPB8	328 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195		A0A1W2PRS3	328 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	TRBC2	A0A5B9	178 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	KIR3DP1	A8MWS1	328 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195		G3V3Y1	287 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	GOLGA8M	H3BSY2	632 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	EIF3F	O00303	357 aa	Predicted RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	PRKN	O60260	465 aa	Predicted RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	CTAG2	O75638	210 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	TUBB4A	P04350	444 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	C8G	P07360	202 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	RNH1	P13489	461 aa	Known RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	DRD2	P14416	443 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	HIST1H2AD	P20671	130 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	ACVR2A	P27037	513 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	PPP2R1B	P30154	601 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	SCTR	P47872	440 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	RGS4	P49798	205 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	SSR4	P51571	173 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	SARNP	P82979	210 aa	Known RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	TIAL1	Q01085	375 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	DHX9	Q08211	1270 aa	Known RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	NIPAL1	Q6NVV3	410 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	LIX1L	Q8IVB5	337 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	ZZZ3	Q8IYH5	903 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	CA13	Q8N1Q1	262 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	MYO1H	Q8N1T3	1032 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	TBC1D19	Q8N5T2	526 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	RNF10	Q8N5U6	811 aa	Known RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	OR2M7	Q8NG81	312 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	OR4K1	Q8NGD4	311 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	NINJ1	Q92982	152 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	NCLN	Q969V3	563 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	LINGO1	Q96FE5	620 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	HIST1H2AH	Q96KK5	128 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	OR4K3	Q96R72	315 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	SMC6	Q96SB8	1091 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	HIST1H2AJ	Q99878	128 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	GPATCH1	Q9BRR8	931 aa	Known RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	TTYH2	Q9BSA4	534 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	H2AFJ	Q9BTM1	129 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	SARG	Q9BW04	601 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	KLHL31	Q9H511	634 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	SLC24A3	Q9HC58	644 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	PNO1	Q9NRX1	252 aa	Known RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	ZNF358	Q9NW07	568 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	ST6GALNAC2	Q9UJ37	374 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	ZFP69B	Q9UJL9	534 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	FBXO5	Q9UKT4	447 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	GUCA1B	Q9UMX6	200 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	PLEKHA6	Q9Y2H5	1048 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	L3MBTL1	Q9Y468	752 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	COMMD10	Q9Y6G5	202 aa		10.24	□□□□□ -0.77
CMC2-223	ENST00000570195	PHF3	Q92576	2039 aa	Known RBP	10.24	□□□□□ -0.77
CMC2-223	ENST00000570195		A0A0G2JNJ9	132 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	MAGEB16	A2A368	324 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	SDR42E2	A6NKP2	422 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195		A8MVJ9	347 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	C4orf51	C9J302	202 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	ACOT7	O00154	380 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	OR6B1	O95007	311 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	FGG	P02679	453 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	GLI4	P10075	376 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	ZFP36L2	P47974	494 aa	Known RBP	10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	GPS1	Q13098	491 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	SP140	Q13342	867 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	CSHL1	Q14406	222 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	HSP90AA5P	Q58FG0	334 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	XKR6	Q5GH73	641 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	HECTD2	Q5U5R9	776 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	LRRC8E	Q6NSJ5	796 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	UGT3A1	Q6NUS8	523 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	PAQR3	Q6TCH7	311 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	ARSK	Q6UWY0	536 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	IL20RB	Q6UXL0	311 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	B3GNT6	Q6ZMB0	384 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	KIAA0408	Q6ZU52	694 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	ANKRD53	Q8N9V6	530 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	SLC5A11	Q8WWX8	675 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	NEIL2	Q969S2	332 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	VMP1	Q96GC9	406 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	TSNARE1	Q96NA8	513 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	CCDC77	Q9BR77	488 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	TTTY12	Q9BZ98	90 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	OCEL1	Q9H607	264 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	IARS2	Q9NSE4	1012 aa	Known RBP	10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	HPF1	Q9NWY4	346 aa		10.23	□□□□□ -0.77
CMC2-223	ENST00000570195	ARL15	Q9NXU5	204 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms