RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SDHAF4Q5VUM1 108 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 ZDHHC24Q6UX98 284 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 TRPM8Q7Z2W7 1104 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 CACUL1Q86Y37 369 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 LINC00518Q8N0U6 118 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 FUKQ8N0W3 1084 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 LPGAT1Q92604 370 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 P3H4Q92791 437 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 PTCHD1Q96NR3 888 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 CPXM1Q96SM3 734 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 TRABDQ9H4I3 376 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.4□□□□□ -1.39
SMG1-217ENST00000569764 UFSP2Q9NUQ7 469 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 SYBUQ9NX95 663 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 USP36Q9P275 1121 aaKnown RBP6.4□□□□□ -1.39
SMG1-217ENST00000569764 RAPGEFL1Q9UHV5 662 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 ASB4Q9Y574 426 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 NFS1Q9Y697 457 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 FAM186AA6NE01 2351 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 CACNA1GO43497 2377 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 ZDBF2Q9HCK1 2354 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 CCDC160A6NGH7 325 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 TTLL8A6PVC2 850 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 FADS2P1A8MWK0 482 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 TMEM229AB2RXF0 380 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ST8SIA3O43173 380 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 COCHO43405 550 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 JRKO75564 520 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 DHFRP00374 187 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 GSTP1P09211 210 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 HIST1H2AGP0C0S8 130 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 GAAP10253 952 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 MYF5P13349 255 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ICAM2P13598 275 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ETS2P15036 469 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 HIST1H2ADP20671 130 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 MMP8P22894 467 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 FASLGP48023 281 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 LRRC14Q15048 493 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 DLG2Q15700 870 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 TSC22D1Q15714 1073 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 PTPN20Q4JDL3 420 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 LGSNQ5TDP6 509 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 TAS1R1Q7RTX1 841 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 LINC00523Q86TU6 105 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 MMAAQ8IVH4 418 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 CCDC28AQ8IWP9 274 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 IQCKQ8N0W5 287 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 FAM46DQ8NEK8 389 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 HCAR2Q8TDS4 363 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 C1orf54Q8WWF1 131 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 C3orf49Q96BT1 292 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 RMND5BQ96G75 393 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 PBKQ96KB5 322 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 HIST1H2AHQ96KK5 128 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 HIST1H2AJQ99878 128 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 H2AFJQ9BTM1 129 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 PAPOLGQ9BWT3 736 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 POLR1EQ9GZS1 481 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 PABPC3Q9H361 631 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 C10orf88Q9H8K7 445 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 SLAMF7Q9NQ25 335 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ZDHHC18Q9NUE0 388 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 MIOSQ9NXC5 875 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 MTCH1Q9NZJ7 389 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 RCOR3Q9P2K3 495 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 ZNF212Q9UDV6 495 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 APOBEC3BQ9UH17 382 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 ANAPC2Q9UJX6 822 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 UBA6A0AVT1 1052 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 ANKRD61A6NGH8 418 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 METTL12A8MUP2 240 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 TMEM114B3SHH9 223 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 TERTO14746 1132 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 NME6O75414 186 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 MATN4O95460 622 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 PEPDP12955 493 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 JUNDP17535 347 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 SUMO1P63165 101 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 GNGT1P63211 74 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 SEMG2Q02383 582 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 TBRG1Q3YBR2 411 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ZNF468Q5VIY5 522 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 MSANTD2Q6P1R3 559 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 LRRC8BQ6P9F7 803 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 CPEB3Q8NE35 698 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 OR1E3Q8WZA6 343 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 DLG3Q92796 817 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ITPKCQ96DU7 683 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 ZNF599Q96NL3 588 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 WDFY2Q96P53 400 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 SLC25A23Q9BV35 468 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 RXFP3Q9NSD7 469 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMG1-217ENST00000569764 AAR2Q9Y312 384 aaKnown RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 PPIL1Q9Y3C6 166 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 HELTA6NFD8 242 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 SRRM3A6NNA2 597 aaPredicted RBP6.39□□□□□ -1.39
SMG1-217ENST00000569764 MGRN1O60291 552 aa6.39□□□□□ -1.39
SMG1-217ENST00000569764 CRCPO75575 148 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms