RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 BHLHE41Q9C0J9 482 aaPredicted RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 NT5DC2Q9H857 520 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 VPS4AQ9UN37 437 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 CEP192Q8TEP8 1941 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 THADAQ6YHU6 1953 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 KIR2DS5A0A0G2JLQ3 304 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 A0A0G2JNG1 304 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 A0A1W2PRB8 838 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 OR5K4A6NMS3 321 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 KIR2DS3K7RE56 304 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 PRAMEF10O60809 474 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 FASP25445 335 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 CRATP43155 626 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 MAZP56270 477 aaKnown RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 RACK1P63244 317 aaKnown RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 GAB1Q13480 694 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 MAP7Q14244 749 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 KIR2DS3Q14952 304 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 KIR2DS5Q14953 304 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 ELOCQ15369 112 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 LRRC23Q53EV4 343 aaPredicted RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 ARMC6Q6NXE6 501 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 TRIM40Q6P9F5 258 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 SZRD1Q7Z422 152 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 MICU2Q8IYU8 434 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 ADGRG5Q8IZF4 528 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 CAMKK1Q8N5S9 505 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 KCT2Q8NC54 265 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 TRPV3Q8NET8 790 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 OR10Q1Q8NGQ4 319 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 TM4SF18Q96CE8 201 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 CCDC115Q96NT0 180 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 TEFMQ96QE5 360 aaKnown RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 OR2A14Q96R47 310 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 TM9SF3Q9HD45 589 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 LHX9Q9NQ69 397 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 SIRT5Q9NXA8 310 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 TEX10Q9NXF1 929 aaPredicted RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 RAPGEFL1Q9UHV5 662 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 ATP6V1HQ9UI12 483 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 FBXW2Q9UKT8 454 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 ACSL6Q9UKU0 697 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 PCDHGA4Q9Y5G9 962 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 PI4KAP42356 2102 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 WDFY4Q6ZS81 3184 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 SAC3D1A6NKF1 404 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 WASHC1A8K0Z3 465 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 C2orf74A8MZ97 194 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 RNASET2O00584 256 aaKnown RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 HNRNPRO43390 633 aaKnown RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 SH3BP5O60239 455 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 PRKRAO75569 313 aaKnown RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 GPIP06744 558 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 CKMT2P17540 419 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 DDCP20711 480 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 ATP6V1C1P21283 382 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 CHI3L1P36222 383 aaPredicted RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 MANFP55145 182 aaKnown RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 POLE2P56282 527 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 C21orf58P58505 322 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 PPP1CAP62136 330 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 KLC1Q07866 573 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 DMWDQ09019 674 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 ABHD18Q0P651 414 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 HSPB3Q12988 150 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 SLAMF1Q13291 335 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 SLC9A5Q14940 896 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 DEFB133Q30KQ1 61 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMG1-215ENST00000568239 OGFRL1Q5TC84 451 aaPredicted RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 ZNF425Q6IV72 752 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 ZNF793Q6ZN11 406 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 ZNF438Q7Z4V0 828 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 UBE3DQ7Z6J8 389 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 GALNT10Q86SR1 603 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 UBALD2Q8IYN6 164 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 GJD3Q8N144 294 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 TMEM102Q8N9M5 508 aaPredicted RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 CADM4Q8NFZ8 388 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 ZCCHC10Q8TBK6 192 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 NETO1Q8TDF5 533 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 UCN3Q969E3 161 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 MS4A6EQ96DS6 147 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 SLC35A5Q9BS91 424 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 TMEM121BQ9BXQ6 578 aaPredicted RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 VCXQ9H320 206 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 SYNPO2LQ9H987 977 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 ZNF282Q9UDV7 671 aaPredicted RBP6.73□□□□□ -1.33
SMG1-215ENST00000568239 BTNL2Q9UIR0 455 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 AP3M1Q9Y2T2 418 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 AP1M2Q9Y6Q5 423 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 UNC13CQ8NB66 2214 aa6.73□□□□□ -1.33
SMG1-215ENST00000568239 TCRBV5S2A0A599 114 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 C10orf142B7Z368 130 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 CASQ2O14958 399 aaPredicted RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 GPR37L1O60883 481 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ERAL1O75616 437 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 ZNF682O95780 498 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 SERPINA1P01009 418 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 CSF2P04141 144 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms