RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 SEC16BQ96JE7 1060 aa23.7■■□□□ 1.38
FANCA-228ENST00000567943 ILKAPQ9H0C8 392 aaPredicted RBP23.7■■□□□ 1.38
FANCA-228ENST00000567943 RIC8BQ9NVN3 520 aa23.7■■□□□ 1.38
FANCA-228ENST00000567943 ASF1BQ9NVP2 202 aa23.7■■□□□ 1.38
FANCA-228ENST00000567943 HIVEP3Q5T1R4 2406 aa23.7■■□□□ 1.38
FANCA-228ENST00000567943 LRIT2A6NDA9 550 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 TCP11X1B4DZS4 312 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 CDC123O75794 336 aaPredicted RBP23.69■■□□□ 1.38
FANCA-228ENST00000567943 WFS1O76024 890 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 ITGAMP11215 1152 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 IL10P22301 178 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 HNRNPH1P31943 449 aaKnown RBP23.69■■□□□ 1.38
FANCA-228ENST00000567943 CASP2P42575 452 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 CPEB2Q7Z5Q1 589 aaKnown RBP23.69■■□□□ 1.38
FANCA-228ENST00000567943 ANKRD37Q7Z713 158 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 IQCKQ8N0W5 287 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 SIRT6Q8N6T7 355 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 GAL3ST3Q96A11 431 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 OR1F2PQ96R84 312 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 LMF1Q96S06 567 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 BARD1Q99728 777 aaKnown RBP23.69■■□□□ 1.38
FANCA-228ENST00000567943 PRM3Q9NNZ6 103 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 PTGFRNQ9P2B2 879 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 XPR1Q9UBH6 696 aa23.69■■□□□ 1.38
FANCA-228ENST00000567943 USP9YO00507 2555 aaPredicted RBP23.68■■□□□ 1.38
FANCA-228ENST00000567943 A0A0G2JN53 185 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 ERI3O43414 337 aaKnown RBP23.68■■□□□ 1.38
FANCA-228ENST00000567943 ZNF500O60304 480 aaPredicted RBP23.68■■□□□ 1.38
FANCA-228ENST00000567943 VPS4BO75351 444 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 SEC24DO94855 1032 aaPredicted RBP23.68■■□□□ 1.38
FANCA-228ENST00000567943 TNFRSF8P28908 595 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 BTN3A2P78410 334 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 UBAP2LQ14157 1087 aaKnown RBP23.68■■□□□ 1.38
FANCA-228ENST00000567943 E2F2Q14209 437 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 PCBP2Q15366 365 aaKnown RBP eCLIP23.68■■□□□ 1.38
FANCA-228ENST00000567943 B3GNTL1Q67FW5 361 aaPredicted RBP23.68■■□□□ 1.38
FANCA-228ENST00000567943 RIPOR1Q6ZS17 1223 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 PTGR2Q8N8N7 351 aaPredicted RBP23.68■■□□□ 1.38
FANCA-228ENST00000567943 PLPP5Q8NEB5 264 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 CATSPER1Q8NEC5 780 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 DNAJB14Q8TBM8 379 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 TSLPQ969D9 159 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 TBC1D20Q96BZ9 403 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 MS4A6EQ96DS6 147 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 MTBPQ96DY7 904 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 FAR2Q96K12 515 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 RHBGQ9H310 441 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 VPS4AQ9UN37 437 aa23.68■■□□□ 1.38
FANCA-228ENST00000567943 SIX3O95343 332 aaPredicted RBP23.67■■□□□ 1.38
FANCA-228ENST00000567943 FHP07954 510 aa23.67■■□□□ 1.38
FANCA-228ENST00000567943 PCDH1Q08174 1060 aa23.67■■□□□ 1.38
FANCA-228ENST00000567943 TIFABQ6ZNK6 161 aa23.67■■□□□ 1.38
FANCA-228ENST00000567943 UBLCP1Q8WVY7 318 aaPredicted RBP23.67■■□□□ 1.38
FANCA-228ENST00000567943 PHF21BQ96EK2 531 aa23.67■■□□□ 1.38
FANCA-228ENST00000567943 TUBB6Q9BUF5 446 aa23.67■■□□□ 1.38
FANCA-228ENST00000567943 EPS8L2Q9H6S3 715 aa23.67■■□□□ 1.38
FANCA-228ENST00000567943 ANKZF1Q9H8Y5 726 aa23.67■■□□□ 1.38
FANCA-228ENST00000567943 CLK4Q9HAZ1 481 aaKnown RBP23.67■■□□□ 1.38
FANCA-228ENST00000567943 C19orf25Q9UFG5 118 aaPredicted RBP23.67■■□□□ 1.38
FANCA-228ENST00000567943 FETUBQ9UGM5 382 aa23.67■■□□□ 1.38
FANCA-228ENST00000567943 TNPO3Q9Y5L0 923 aaKnown RBP23.67■■□□□ 1.38
FANCA-228ENST00000567943 IQANK1A0A1B0GTG1 560 aa23.66■■□□□ 1.38
FANCA-228ENST00000567943 B4GALT2O60909 372 aa23.66■■□□□ 1.38
FANCA-228ENST00000567943 PCNAP12004 261 aa23.66■■□□□ 1.38
FANCA-228ENST00000567943 MRPL49Q13405 166 aaKnown RBP23.66■■□□□ 1.38
FANCA-228ENST00000567943 MED27Q6P2C8 311 aa23.66■■□□□ 1.38
FANCA-228ENST00000567943 GOLGA7Q7Z5G4 137 aa23.66■■□□□ 1.38
FANCA-228ENST00000567943 MYLK4Q86YV6 388 aaPredicted RBP23.66■■□□□ 1.38
FANCA-228ENST00000567943 UBE2E3Q969T4 207 aa23.66■■□□□ 1.38
FANCA-228ENST00000567943 MRPL57Q9BQC6 102 aaKnown RBP23.66■■□□□ 1.38
FANCA-228ENST00000567943 CCDC77Q9BR77 488 aa23.66■■□□□ 1.38
FANCA-228ENST00000567943 REXO4Q9GZR2 422 aaKnown RBP23.66■■□□□ 1.38
FANCA-228ENST00000567943 PLA2G3Q9NZ20 509 aa23.66■■□□□ 1.38
FANCA-228ENST00000567943 PSMC3IPQ9P2W1 217 aaPredicted RBP23.66■■□□□ 1.38
FANCA-228ENST00000567943 SMIM24O75264 130 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 RNH1P13489 461 aaKnown RBP23.65■■□□□ 1.38
FANCA-228ENST00000567943 JAK1P23458 1154 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 EEF1DP29692 281 aaKnown RBP23.65■■□□□ 1.38
FANCA-228ENST00000567943 HPDP32754 393 aaPredicted RBP23.65■■□□□ 1.38
FANCA-228ENST00000567943 PLA2G16P53816 162 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 GTF2H2Q13888 395 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 ZNF169Q14929 603 aaPredicted RBP23.65■■□□□ 1.38
FANCA-228ENST00000567943 ABRAXAS2Q15018 415 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 ADPRMQ3LIE5 342 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 PLAG1Q6DJT9 500 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 GRHL2Q6ISB3 625 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 GTF2H2CQ6P1K8 395 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 TRIM40Q6P9F5 258 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 LAS2Q8IYD9 372 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 CA13Q8N1Q1 262 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 OR2L5Q8NG80 312 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 ZNF473Q8WTR7 871 aaKnown RBP23.65■■□□□ 1.38
FANCA-228ENST00000567943 CNDP1Q96KN2 507 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 F2RL3Q96RI0 385 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 MRPL46Q9H2W6 279 aaKnown RBP23.65■■□□□ 1.38
FANCA-228ENST00000567943 ACTR8Q9H981 624 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 MAP10Q9P2G4 905 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 TBK1Q9UHD2 729 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 TMCO1Q9UM00 188 aa23.65■■□□□ 1.38
FANCA-228ENST00000567943 MAGEB17A8MXT2 336 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms