RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 ELAC2Q9BQ52 826 aaKnown RBP14.05□□□□□ -0.16
SPG7-213ENST00000566221 ULBP3Q9BZM4 244 aa14.05□□□□□ -0.16
SPG7-213ENST00000566221 NRSN2Q9GZP1 204 aa14.05□□□□□ -0.16
SPG7-213ENST00000566221 FAM107BQ9H098 131 aa14.05□□□□□ -0.16
SPG7-213ENST00000566221 LRTM1Q9HBL6 345 aa14.05□□□□□ -0.16
SPG7-213ENST00000566221 C1orf109Q9NX04 203 aa14.05□□□□□ -0.16
SPG7-213ENST00000566221 MRPS2Q9Y399 296 aaKnown RBP14.05□□□□□ -0.16
SPG7-213ENST00000566221 ATP6AP2A0A1C7CYW4 349 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 GALR3O60755 368 aaPredicted RBP14.04□□□□□ -0.16
SPG7-213ENST00000566221 DIAPH2O60879 1101 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 ATP6AP2O75787 350 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 KLHL18O94889 574 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 TNFSF15O95150 251 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 SCELO95171 688 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 MED26O95402 600 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 NSA2O95478 260 aaKnown RBP14.04□□□□□ -0.16
SPG7-213ENST00000566221 IL1RNP18510 177 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 AVPR1BP47901 424 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 MTTPP55157 894 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 RPL38P63173 70 aaKnown RBP14.04□□□□□ -0.16
SPG7-213ENST00000566221 MAD2L1Q13257 205 aaPredicted RBP14.04□□□□□ -0.16
SPG7-213ENST00000566221 SMU1Q2TAY7 513 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 GALNTL6Q49A17 601 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 DEFB134Q4QY38 66 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 VWA5B1Q5TIE3 1220 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 PRAMEF17Q5VTA0 474 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 OR4C11Q6IEV9 310 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 CGB2Q6NT52 195 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 PRMT9Q6P2P2 845 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 EPGNQ6UW88 154 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 ACAD11Q709F0 780 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 UBE3DQ7Z6J8 389 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 ZFAND4Q86XD8 727 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 CACNA2D3Q8IZS8 1091 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 C1orf52Q8N6N3 182 aaKnown RBP14.04□□□□□ -0.16
SPG7-213ENST00000566221 CCDC197Q8NCU1 140 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 CHTF18Q8WVB6 975 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 CLIP3Q96DZ5 547 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 MAELQ96JY0 434 aaKnown RBP14.04□□□□□ -0.16
SPG7-213ENST00000566221 QRFPRQ96P65 431 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 SERINC2Q96SA4 455 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 ZNF717Q9BY31 904 aaPredicted RBP14.04□□□□□ -0.16
SPG7-213ENST00000566221 LHX9Q9NQ69 397 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 DHCR7Q9UBM7 475 aaKnown RBP14.04□□□□□ -0.16
SPG7-213ENST00000566221 NDOR1Q9UHB4 597 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 ADAM29Q9UKF5 820 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 CDC14AQ9UNH5 594 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 ARL2BPQ9Y2Y0 163 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 TMED5Q9Y3A6 229 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 NAALAD2Q9Y3Q0 740 aa14.04□□□□□ -0.16
SPG7-213ENST00000566221 ZFYVE26Q68DK2 2539 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 A0A0A6YYC8 382 aaPredicted RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 A0A0G2JN53 185 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 A0A0G2JND7 137 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 C9orf172C9J069 976 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 H0YIG0 161 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 I3L1I5 382 aaPredicted RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 RTCAO00442 366 aaKnown RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 NVLO15381 856 aaKnown RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 FOXS1O43638 330 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 B3GALT2O43825 422 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 PEX11AO75192 247 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 SEC22BO75396 215 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 KIAA0754O94854 1291 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 PRR35P0CG20 571 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 ACPPP15309 386 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 HIST1H1TP22492 207 aaPredicted RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 ATP5A1P25705 553 aaKnown RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 CERS1P27544 350 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 MAPK1P28482 360 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 EPHA3P29320 983 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 RBMS1P29558 406 aaKnown RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 BSGP35613 385 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 IDH3AP50213 366 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 SNRPNP63162 240 aaKnown RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 BTN3A2P78410 334 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 SLC9B1Q4ZJI4 515 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 C6orf136Q5SQH8 315 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 GALNT18Q6P9A2 607 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 PRSS41Q7RTY9 318 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 PDSS2Q86YH6 399 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 ZCCHC7Q8N3Z6 543 aaKnown RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 OR9A4Q8NGU2 314 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 RFWD2Q8NHY2 731 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 ACTRT2Q8TDY3 377 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 NXPE2Q96DL1 559 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 THOC1Q96FV9 657 aaKnown RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 APIPQ96GX9 242 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 LRFN5Q96NI6 719 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 WDR55Q9H6Y2 383 aaPredicted RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 DDX31Q9H8H2 851 aaKnown RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 AKTIPQ9H8T0 292 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 CLK4Q9HAZ1 481 aaKnown RBP14.03□□□□□ -0.16
SPG7-213ENST00000566221 PRDM7Q9NQW5 492 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 SIRT5Q9NXA8 310 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 MCM8Q9UJA3 840 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 DCTN4Q9UJW0 460 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 PCDHGA7Q9Y5G6 932 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 CEP295Q9C0D2 2601 aa14.03□□□□□ -0.16
SPG7-213ENST00000566221 A0A0A6YYD5 115 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms