RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ADNP2Q6IQ32 1131 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 RHBDD2Q6NTF9 364 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF517Q6ZMY9 492 aaPredicted RBP12□□□□□ -0.49
SF3B3-206ENST00000565990 TRIM46Q7Z4K8 759 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 TMEM126BQ8IUX1 230 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 KCT2Q8NC54 265 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 RBM15BQ8NDT2 890 aaKnown RBP12□□□□□ -0.49
SF3B3-206ENST00000565990 MS4A6EQ96DS6 147 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 RILPQ96NA2 401 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 MACROD1Q9BQ69 325 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 NLNQ9BYT8 704 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 ILKAPQ9H0C8 392 aaPredicted RBP12□□□□□ -0.49
SF3B3-206ENST00000565990 BRF2Q9HAW0 419 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 FARSBQ9NSD9 589 aaKnown RBP12□□□□□ -0.49
SF3B3-206ENST00000565990 STARD5Q9NSY2 213 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 NMRK1Q9NWW6 199 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 NDE1Q9NXR1 346 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 RUVBL1Q9Y265 456 aaKnown RBP12□□□□□ -0.49
SF3B3-206ENST00000565990 RAP2CQ9Y3L5 183 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 TMEM184BQ9Y519 407 aaPredicted RBP12□□□□□ -0.49
SF3B3-206ENST00000565990 SPTBN2O15020 2390 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 MAGEA13PA6NCF6 341 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 MAGEB17A8MXT2 336 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 NPIPB8E9PQR5 432 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 LYPLA1O75608 230 aaPredicted RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 SCRG1O75711 98 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 DLGAP3O95886 979 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 PDYNP01213 254 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 KRT6AP02538 564 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 KRT6BP04259 564 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 EIF2S1P05198 315 aaKnown RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 SLC35G6P0C7Q6 338 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 HSD3B1P14060 373 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF28P17035 718 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 SPINK2P20155 84 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 HSD3B2P26439 372 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 CD82P27701 267 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 RBMS1P29558 406 aaKnown RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 SLC5A2P31639 672 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 KRT6CP48668 564 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 RPL14P50914 215 aaKnown RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 SH3BGRP55822 239 aaPredicted RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 SNRPNP63162 240 aaKnown RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 MAP7Q14244 749 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 ABRAXAS2Q15018 415 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 TMEM35AQ53FP2 167 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 PRAMEF17Q5VTA0 474 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF385CQ66K41 422 aaPredicted RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 PGM2L1Q6PCE3 622 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 TREML1Q86YW5 311 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 ULK2Q8IYT8 1036 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 ACTRT2Q8TDY3 377 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 UTP15Q8TED0 518 aaKnown RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 CMTM7Q96FZ5 175 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 C10orf90Q96M02 699 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 KCNA7Q96RP8 456 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 MTERF1Q99551 399 aaKnown RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF184Q99676 751 aaPredicted RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 MS4A8Q9BY19 250 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 KLHL31Q9H511 634 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 ELOVL6Q9H5J4 265 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 DMRT3Q9NQL9 472 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 PRDM7Q9NQW5 492 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 VTI1BQ9UEU0 232 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 PRPF19Q9UMS4 504 aaKnown RBP11.99□□□□□ -0.49
SF3B3-206ENST00000565990 SRPK3Q9UPE1 567 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 CCL27Q9Y4X3 112 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 TIMM22Q9Y584 194 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 DNAJC15Q9Y5T4 150 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 CCDC88CQ9P219 2028 aa11.99□□□□□ -0.49
SF3B3-206ENST00000565990 URADA6NGE7 173 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 FFAR3O14843 346 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 DSCR3O14972 297 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 GPR42O15529 346 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 NDUFS4O43181 175 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 FOXS1O43638 330 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 HSPA4LO95757 839 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 TGFB1P01137 390 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 NTRK1P04629 796 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 PCNAP12004 261 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 CPOXP36551 454 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 ARL1P40616 181 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 STXBP1P61764 594 aaKnown RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 IRX1P78414 480 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 RGS1Q08116 209 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 HERC3Q15034 1050 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 TCHHL1Q5QJ38 904 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 KHDRBS2Q5VWX1 349 aaKnown RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 PRMT9Q6P2P2 845 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 CHSY3Q70JA7 882 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 UBE3DQ7Z6J8 389 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 RNF175Q8N4F7 328 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 TTC29Q8NA56 475 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 PROKR1Q8TCW9 393 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 SELENOMQ8WWX9 145 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 NXPE2Q96DL1 559 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 MTFMTQ96DP5 389 aaKnown RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 MVB12AQ96EY5 273 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF578Q96N58 590 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 GBP5Q96PP8 586 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms