RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 AFAP1L2Q8N4X5 818 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 KCT2Q8NC54 265 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 LRRC8CQ8TDW0 803 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 MTERF1Q99551 399 aaKnown RBP24.61■■□□□ 1.53
NME3-208ENST00000565379 ROGDIQ9GZN7 287 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 CLK4Q9HAZ1 481 aaKnown RBP24.61■■□□□ 1.53
NME3-208ENST00000565379 ANKHQ9HCJ1 492 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 RAP2CQ9Y3L5 183 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 TRAF6Q9Y4K3 522 aa24.61■■□□□ 1.53
NME3-208ENST00000565379 ZNF891A8MT65 544 aaPredicted RBP24.6■■□□□ 1.53
NME3-208ENST00000565379 MAGEB17A8MXT2 336 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 MEN1O00255 615 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 ALOX12P18054 663 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 ALAS2P22557 587 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 TSFMP43897 325 aaKnown RBP24.6■■□□□ 1.53
NME3-208ENST00000565379 SH2D4BQ5SQS7 431 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 DEPDC1Q5TB30 811 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 KHDRBS2Q5VWX1 349 aaKnown RBP24.6■■□□□ 1.53
NME3-208ENST00000565379 KANK2Q63ZY3 851 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 TRIM40Q6P9F5 258 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 DSELQ8IZU8 1212 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 OR2L5Q8NG80 312 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 ZNF75CPQ92670 426 aaPredicted RBP24.6■■□□□ 1.53
NME3-208ENST00000565379 MS4A6EQ96DS6 147 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 CCT7Q99832 543 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 AKIRIN1Q9H9L7 192 aaPredicted RBP24.6■■□□□ 1.53
NME3-208ENST00000565379 PFDN4Q9NQP4 134 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 HAO1Q9UJM8 370 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 CROTQ9UKG9 612 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 PADI1Q9ULC6 663 aa24.6■■□□□ 1.53
NME3-208ENST00000565379 H0YIG0 161 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 SNNO75324 88 aaPredicted RBP24.59■■□□□ 1.53
NME3-208ENST00000565379 SEMA3DO95025 777 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 NSA2O95478 260 aaKnown RBP24.59■■□□□ 1.53
NME3-208ENST00000565379 ONECUT2O95948 504 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 PDYNP01213 254 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 SMIM10L1P0DMW3 83 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 NEK2P51955 445 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 RPS13P62277 151 aaKnown RBP24.59■■□□□ 1.53
NME3-208ENST00000565379 DCDP81605 110 aaKnown RBP24.59■■□□□ 1.53
NME3-208ENST00000565379 SLC38A9Q8NBW4 561 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 FAM76AQ8TAV0 307 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 UTP15Q8TED0 518 aaKnown RBP24.59■■□□□ 1.53
NME3-208ENST00000565379 CKAP2Q8WWK9 683 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 STARD8Q92502 1023 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 KIAA1143Q96AT1 154 aaPredicted RBP24.59■■□□□ 1.53
NME3-208ENST00000565379 SMIM10Q96HG1 83 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 FAR2Q96K12 515 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 GBP5Q96PP8 586 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 KCNC2Q96PR1 638 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 MACROD1Q9BQ69 325 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 SHCBP1LQ9BZQ2 653 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 AHSPQ9NZD4 102 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 DHCR7Q9UBM7 475 aaKnown RBP24.59■■□□□ 1.53
NME3-208ENST00000565379 NDOR1Q9UHB4 597 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 TIMM22Q9Y584 194 aa24.59■■□□□ 1.53
NME3-208ENST00000565379 TERTO14746 1132 aaKnown RBP24.58■■□□□ 1.53
NME3-208ENST00000565379 ITM2AO43736 263 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 TBX6O95947 436 aaPredicted RBP24.58■■□□□ 1.53
NME3-208ENST00000565379 TGFB1P01137 390 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 STATHP02808 62 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 CD63P08962 238 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 ARRB2P32121 409 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 FOXA1P55317 472 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 CDC20Q12834 499 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 CES4AQ5XG92 561 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 ADNP2Q6IQ32 1131 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 RGMAQ96B86 450 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 MTFMTQ96DP5 389 aaKnown RBP24.58■■□□□ 1.53
NME3-208ENST00000565379 MAGEB18Q96M61 343 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 KCNA7Q96RP8 456 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 TBCDQ9BTW9 1192 aa24.58■■□□□ 1.53
NME3-208ENST00000565379 ERI3O43414 337 aaKnown RBP24.57■■□□□ 1.52
NME3-208ENST00000565379 ZNF888P0CJ79 500 aaPredicted RBP24.57■■□□□ 1.52
NME3-208ENST00000565379 HNRNPH1P31943 449 aaKnown RBP24.57■■□□□ 1.52
NME3-208ENST00000565379 DLSTP36957 453 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 RPL14P50914 215 aaKnown RBP24.57■■□□□ 1.52
NME3-208ENST00000565379 SGO1Q5FBB7 561 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 ZNF385CQ66K41 422 aaPredicted RBP24.57■■□□□ 1.52
NME3-208ENST00000565379 BORAQ6PGQ7 559 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 ZNF517Q6ZMY9 492 aaPredicted RBP24.57■■□□□ 1.52
NME3-208ENST00000565379 RGS9BPQ6ZS82 235 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 TRIM46Q7Z4K8 759 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 ZCCHC10Q8TBK6 192 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 F2RL3Q96RI0 385 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 SORT1Q99523 831 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 ZNF304Q9HCX3 659 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 LHX9Q9NQ69 397 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 ZDHHC2Q9UIJ5 367 aa24.57■■□□□ 1.52
NME3-208ENST00000565379 SLC28A1O00337 649 aa24.56■■□□□ 1.52
NME3-208ENST00000565379 FOXS1O43638 330 aa24.56■■□□□ 1.52
NME3-208ENST00000565379 GALR3O60755 368 aaPredicted RBP24.56■■□□□ 1.52
NME3-208ENST00000565379 LYPLA1O75608 230 aaPredicted RBP24.56■■□□□ 1.52
NME3-208ENST00000565379 FURINP09958 794 aa24.56■■□□□ 1.52
NME3-208ENST00000565379 RAP1GDS1P52306 607 aa24.56■■□□□ 1.52
NME3-208ENST00000565379 POLE2P56282 527 aa24.56■■□□□ 1.52
NME3-208ENST00000565379 DEFB109BQ30KR1 87 aa24.56■■□□□ 1.52
NME3-208ENST00000565379 CLEC6AQ6EIG7 209 aa24.56■■□□□ 1.52
NME3-208ENST00000565379 ABHD17CQ6PCB6 329 aa24.56■■□□□ 1.52
NME3-208ENST00000565379 C20orf27Q9GZN8 174 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms