RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 OR5K1Q8NHB7 308 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 SDCCAG3Q96C92 435 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 BMFQ96LC9 184 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 MBOAT4Q96T53 435 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 BARD1Q99728 777 aaKnown RBP18.24■□□□□ 0.51
SMPD3-203ENST00000563226 SPATA9Q9BWV2 254 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 TOR3AQ9H497 397 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 CLK4Q9HAZ1 481 aaKnown RBP18.24■□□□□ 0.51
SMPD3-203ENST00000563226 IL1RAPQ9NPH3 570 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 SLAMF7Q9NQ25 335 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 C5AR2Q9P296 337 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 FAF1Q9UNN5 650 aaPredicted RBP18.24■□□□□ 0.51
SMPD3-203ENST00000563226 CORO2BQ9UQ03 480 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 DGKBQ9Y6T7 804 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 CCDC85CA6NKD9 419 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 TMEM229AB2RXF0 380 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 PRICKLE3O43900 615 aaPredicted RBP18.24■□□□□ 0.51
SMPD3-203ENST00000563226 KCNJ13O60928 360 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 E2F6O75461 281 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 TNFRSF21O75509 655 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 HPRP00739 348 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 SERPIND1P05546 499 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 TPMTP51580 245 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 COL19A1Q14993 1142 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 LAPTM4AQ15012 233 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 PATL1Q86TB9 770 aaKnown RBP18.24■□□□□ 0.51
SMPD3-203ENST00000563226 CREB3L4Q8TEY5 395 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 ASB12Q8WXK4 309 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 UCN3Q969E3 161 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 TSACCQ96A04 125 aaPredicted RBP18.24■□□□□ 0.51
SMPD3-203ENST00000563226 MACROD1Q9BQ69 325 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 MVB12BQ9H7P6 319 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 TRPV5Q9NQA5 729 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 TAS2R9Q9NYW1 312 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 RPS6KA6Q9UK32 745 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 MDC1Q14676 2089 aaKnown RBP18.24■□□□□ 0.51
SMPD3-203ENST00000563226 TCRBV21S2A2A0A5A6 115 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 CAPN5O15484 640 aaPredicted RBP18.23■□□□□ 0.51
SMPD3-203ENST00000563226 NARSO43776 548 aaKnown RBP18.23■□□□□ 0.51
SMPD3-203ENST00000563226 ASGR2P07307 311 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 DDCP20711 480 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 SHMT2P34897 504 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 PCGF2P35227 344 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 SOAT1P35610 550 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 BCL6P41182 706 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 ALDH9A1P49189 494 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 NFATC4Q14934 902 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 SLC5A12Q1EHB4 618 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 LPCAT2Q7L5N7 544 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 C8orf33Q9H7E9 229 aaPredicted RBP18.23■□□□□ 0.51
SMPD3-203ENST00000563226 SYNPO2LQ9H987 977 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 USE1Q9NZ43 259 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 KLHL20Q9Y2M5 609 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.23■□□□□ 0.51
SMPD3-203ENST00000563226 TRIOO75962 3097 aa18.23■□□□□ 0.51
SMPD3-203ENST00000563226 SMIM31A0A1B0GVY4 71 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 H0YAE9 185 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 HAT1O14929 419 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 CEP68Q76N32 757 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 RNF130Q86XS8 419 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 C11orf65Q8NCR3 313 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 OR52N2Q8NGI0 321 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 POP5Q969H6 163 aaKnown RBP18.22■□□□□ 0.51
SMPD3-203ENST00000563226 TPD52L3Q96J77 140 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 MUS81Q96NY9 551 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 TEFMQ96QE5 360 aaKnown RBP18.22■□□□□ 0.51
SMPD3-203ENST00000563226 RAB11FIP5Q9BXF6 653 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 AMBRA1Q9C0C7 1298 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 PITHD1Q9GZP4 211 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-203ENST00000563226 EPB41L1Q9H4G0 881 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 CXorf36Q9H7Y0 433 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 MRPS30Q9NP92 439 aaKnown RBP18.22■□□□□ 0.51
SMPD3-203ENST00000563226 TEX10Q9NXF1 929 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-203ENST00000563226 MAP4K5Q9Y4K4 846 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 FANCMQ8IYD8 2048 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 C4orf51C9J302 202 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 FKBP9O95302 570 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 HOXC4P09017 264 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-203ENST00000563226 ETS2P15036 469 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 GABRG2P18507 467 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 SERPINB1P30740 379 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 PIGAP37287 484 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 PEX19P40855 299 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 PLA2G16P53816 162 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 KCTD21Q4G0X4 260 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 ABRAXAS1Q6UWZ7 409 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 RBM44Q6ZP01 1051 aaKnown RBP18.22■□□□□ 0.51
SMPD3-203ENST00000563226 FKBP9P1Q75LS8 142 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 PJA1Q8NG27 643 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 RGMAQ96B86 450 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 TSC22D3Q99576 134 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 ASPSCR1Q9BZE9 553 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 KLHL31Q9H511 634 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 SNX11Q9Y5W9 270 aa18.22■□□□□ 0.51
SMPD3-203ENST00000563226 HS6ST1O60243 411 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 OPN1SWP03999 348 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 FABP3P05413 133 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 CHI3L1P36222 383 aaPredicted RBP18.21■□□□□ 0.51
SMPD3-203ENST00000563226 NR1H2P55055 460 aa18.21■□□□□ 0.51
SMPD3-203ENST00000563226 MYBPC3Q14896 1274 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms