RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 SHBGP04278 402 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 CYC1P08574 325 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 RBP1P09455 135 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 SBK3P0C264 359 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 COL6A2P12110 1019 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 MAOAP21397 527 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 IL10P22301 178 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 CERS1P27544 350 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 EEF1DP29692 281 aaKnown RBP18.19■□□□□ 0.5
TMEM249-202ENST00000562477 DDX39BQ13838 428 aaKnown RBP18.19■□□□□ 0.5
TMEM249-202ENST00000562477 GTF2H2Q13888 395 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 TSNAXIP1Q2TAA8 658 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 SFT2D3Q587I9 215 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 B3GNTL1Q67FW5 361 aaPredicted RBP18.19■□□□□ 0.5
TMEM249-202ENST00000562477 GRHL2Q6ISB3 625 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 NIPAL1Q6NVV3 410 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 GTF2H2CQ6P1K8 395 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 MED27Q6P2C8 311 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 ABHD17CQ6PCB6 329 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 RPS27LQ71UM5 84 aaKnown RBP18.19■□□□□ 0.5
TMEM249-202ENST00000562477 MYLK4Q86YV6 388 aaPredicted RBP18.19■□□□□ 0.5
TMEM249-202ENST00000562477 LAS2Q8IYD9 372 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 ZADH2Q8N4Q0 377 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 OR2L5Q8NG80 312 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 OR7G3Q8NG95 312 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 PNPLA2Q96AD5 504 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 MIB2Q96AX9 1013 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 FAR2Q96K12 515 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 NSUN5Q96P11 429 aaKnown RBP18.19■□□□□ 0.5
TMEM249-202ENST00000562477 TUBB6Q9BUF5 446 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 MS4A8Q9BY19 250 aa18.19■□□□□ 0.5
TMEM249-202ENST00000562477 C19orf25Q9UFG5 118 aaPredicted RBP18.19■□□□□ 0.5
TMEM249-202ENST00000562477 FOXO6A8MYZ6 492 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 PSMD12O00232 456 aaPredicted RBP18.18■□□□□ 0.5
TMEM249-202ENST00000562477 RTCAO00442 366 aaKnown RBP18.18■□□□□ 0.5
TMEM249-202ENST00000562477 KLHL41O60662 606 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 TGFB1P01137 390 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 SOX11P35716 441 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 HNRNPFP52597 415 aaKnown RBP18.18■□□□□ 0.5
TMEM249-202ENST00000562477 FAM219BQ5XKK7 198 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 PAPD4Q6PIY7 484 aaKnown RBP18.18■□□□□ 0.5
TMEM249-202ENST00000562477 IGFL2Q6UWQ7 119 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 ISLR2Q6UXK2 745 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 ZNF793Q6ZN11 406 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 CUZD1Q86UP6 607 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 TMEM151AQ8N4L1 468 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 EIF1ADQ8N9N8 165 aaKnown RBP18.18■□□□□ 0.5
TMEM249-202ENST00000562477 TMEM52Q8NDY8 209 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 MAGEB10Q96LZ2 347 aaPredicted RBP18.18■□□□□ 0.5
TMEM249-202ENST00000562477 PTCHD1Q96NR3 888 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 MRPL57Q9BQC6 102 aaKnown RBP18.18■□□□□ 0.5
TMEM249-202ENST00000562477 ACTR8Q9H981 624 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 CLK4Q9HAZ1 481 aaKnown RBP18.18■□□□□ 0.5
TMEM249-202ENST00000562477 SLAMF7Q9NQ25 335 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 NECTIN3Q9NQS3 549 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 PSMC3IPQ9P2W1 217 aaPredicted RBP18.18■□□□□ 0.5
TMEM249-202ENST00000562477 TBK1Q9UHD2 729 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 B3GNT3Q9Y2A9 372 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 RNF11Q9Y3C5 154 aa18.18■□□□□ 0.5
TMEM249-202ENST00000562477 SHANK1Q9Y566 2161 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 GOLGA8RI6L899 631 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 SAP18O00422 153 aaKnown RBP18.17■□□□□ 0.5
TMEM249-202ENST00000562477 PRMT3O60678 531 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 JAK1P23458 1154 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 TNFRSF8P28908 595 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 PIK3CGP48736 1102 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 OR4D2P58180 307 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 ACTN3Q08043 901 aaPredicted RBP18.17■□□□□ 0.5
TMEM249-202ENST00000562477 MFAP5Q13361 173 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 BTBD16Q32M84 506 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 LGSNQ5TDP6 509 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 TRIM40Q6P9F5 258 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 Q6ZS92 163 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 FAM47BQ8NA70 645 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 HUS1BQ8NHY5 278 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 CPT1CQ8TCG5 803 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 MZB1Q8WU39 189 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 UBLCP1Q8WVY7 318 aaPredicted RBP18.17■□□□□ 0.5
TMEM249-202ENST00000562477 TM9SF4Q92544 642 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 UBE2E3Q969T4 207 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 MTBPQ96DY7 904 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 CDK15Q96Q40 435 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 CSF3RQ99062 836 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 SORBS1Q9BX66 1292 aaKnown RBP18.17■□□□□ 0.5
TMEM249-202ENST00000562477 MRPL46Q9H2W6 279 aaKnown RBP18.17■□□□□ 0.5
TMEM249-202ENST00000562477 OR51B5Q9H339 312 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 NOL11Q9H8H0 719 aaKnown RBP18.17■□□□□ 0.5
TMEM249-202ENST00000562477 IPPKQ9H8X2 491 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 PRDM7Q9NQW5 492 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 PLA2G3Q9NZ20 509 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 PCTPQ9UKL6 214 aa18.17■□□□□ 0.5
TMEM249-202ENST00000562477 TNPO3Q9Y5L0 923 aaKnown RBP18.17■□□□□ 0.5
TMEM249-202ENST00000562477 IGKV3D-11A0A0A0MRZ8 115 aa18.16■□□□□ 0.5
TMEM249-202ENST00000562477 TGFBR3LH3BV60 316 aa18.16■□□□□ 0.5
TMEM249-202ENST00000562477 OR7A17O14581 309 aa18.16■□□□□ 0.5
TMEM249-202ENST00000562477 B3GALT2O43825 422 aa18.16■□□□□ 0.5
TMEM249-202ENST00000562477 SMIM24O75264 130 aa18.16■□□□□ 0.5
TMEM249-202ENST00000562477 F10P00742 488 aa18.16■□□□□ 0.5
TMEM249-202ENST00000562477 RAB38P57729 211 aa18.16■□□□□ 0.5
TMEM249-202ENST00000562477 KCNC4Q03721 635 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms