RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 VPS4AQ9UN37 437 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 PLAAQ9Y263 795 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 BAHCC1Q9P281 2608 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 DYTNA2CJ06 578 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 A8MUI8 341 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 MAGEB17A8MXT2 336 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 C4orf51C9J302 202 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 FAM227AF5H4B4 570 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 SIX3O95343 332 aaPredicted RBP12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 TGFB1P01137 390 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 CELA2AP08217 269 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 SMIM10L1P0DMW3 83 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 ITGAMP11215 1152 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 MAOAP21397 527 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 EEF1DP29692 281 aaKnown RBP12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 CASP2P42575 452 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 MAGEA12P43365 314 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 PIK3CGP48736 1102 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 RAP1GDS1P52306 607 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 ARG2P78540 354 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 PHEXP78562 749 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 RHAGQ02094 409 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 GTF2H2Q13888 395 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 NAA30Q147X3 362 aaPredicted RBP12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 PLEKHN1Q494U1 663 aaPredicted RBP12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 CRB2Q5IJ48 1285 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 GTF2H2CQ6P1K8 395 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 ADGRD1Q6QNK2 874 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 IGFL3Q6UXB1 125 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 RIPOR1Q6ZS17 1223 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 CHSY3Q70JA7 882 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 GOLGA7Q7Z5G4 137 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 CA13Q8N1Q1 262 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 PTGR2Q8N8N7 351 aaPredicted RBP12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 ARMC2Q8NEN0 867 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 TSLPQ969D9 159 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 ISL2Q96A47 359 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 SMIM10Q96HG1 83 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 LPAR4Q99677 370 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 WDR77Q9BQA1 342 aaPredicted RBP12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 CENPKQ9BS16 269 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 AICDAQ9GZX7 198 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 MRPL46Q9H2W6 279 aaKnown RBP12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 CLK4Q9HAZ1 481 aaKnown RBP12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 LANCL2Q9NS86 450 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 PSMC3IPQ9P2W1 217 aaPredicted RBP12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 COPG2Q9UBF2 871 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 TEKT2Q9UIF3 430 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 TMCO1Q9UM00 188 aa12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 MRPS33Q9Y291 106 aaKnown RBP12.21□□□□□ -0.45
CTDSPL2-209ENST00000560620 DOCK10Q96BY6 2186 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 SMIM23A6NLE4 172 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 SAP18O00422 153 aaKnown RBP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 CLDN4O14493 209 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 MYBL2P10244 700 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 CERS1P27544 350 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 SSR2P43308 183 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 MTTPP55157 894 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 BTG2P78543 158 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 FOXK1P85037 733 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 ZNF33BQ06732 778 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 SLC13A2Q13183 592 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 MFAP5Q13361 173 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 PCBP2Q15366 365 aaKnown RBP eCLIP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 INPP5JQ15735 1006 aaPredicted RBP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 EXT1Q16394 746 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 CPSF6Q16630 551 aaKnown RBP eCLIP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 ABHD17BQ5VST6 288 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 LIPJQ5W064 366 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 TTC19Q6DKK2 380 aaPredicted RBP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 GRHL2Q6ISB3 625 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 PAPD4Q6PIY7 484 aaKnown RBP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 FAM47BQ8NA70 645 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 PLPP5Q8NEB5 264 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 SRFBP1Q8NEF9 429 aaKnown RBP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 OR7G3Q8NG95 312 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 PPP4R1Q8TF05 950 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 REPS1Q96D71 796 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 KCNC2Q96PR1 638 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 SERINC2Q96SA4 455 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 MTERF1Q99551 399 aaKnown RBP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 MRPL57Q9BQC6 102 aaKnown RBP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 NPLQ9BXD5 320 aaPredicted RBP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 ROGDIQ9GZN7 287 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 NOL11Q9H8H0 719 aaKnown RBP12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 KCNK13Q9HB14 408 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 PRDM9Q9NQV7 894 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 PCDHGA11Q9Y5H2 935 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 CSAG2Q9Y5P2 127 aa12.2□□□□□ -0.46
CTDSPL2-209ENST00000560620 A0A1W2PQ72 361 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 A8MUA0 341 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 GOLGA8RI6L899 631 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 E2F3O00716 465 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 KLK8O60259 260 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 SORBS2O94875 1100 aaKnown RBP12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 F10P00742 488 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 TAC1P20366 129 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 GCAP28676 217 aa12.19□□□□□ -0.46
CTDSPL2-209ENST00000560620 SERPINB1P30740 379 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms