RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 KCNK13Q9HB14 408 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 KCMF1Q9P0J7 381 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 DHCR7Q9UBM7 475 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 RALYQ9UKM9 306 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 NUP210LQ5VU65 1888 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 A0A0A6YYD5 115 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 MEN1O00255 615 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 ERI3O43414 337 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 BRINP1O60477 761 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 SHOX2O60902 331 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 DNAJB6O75190 326 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 STK17BO94768 372 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 KIAA0754O94854 1291 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 CHEK2O96017 543 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 LINC00032P0C843 101 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 HIST1H1TP22492 207 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 ATP5A1P25705 553 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 DSG2Q14126 1118 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 NDUFA9Q16795 377 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 SGO1Q5FBB7 561 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 TMEM164Q5U3C3 297 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 OR4C11Q6IEV9 310 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 OGFOD2Q6N063 350 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 MRPL14Q6P1L8 145 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 EPGNQ6UW88 154 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 SCIMPQ6UWF3 145 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 FAM47EQ6ZV65 393 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 TTLL10Q6ZVT0 673 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 SHISA5Q8N114 240 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 AGR3Q8TD06 166 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 NXPE2Q96DL1 559 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 APIPQ96GX9 242 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 ZNF578Q96N58 590 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 MRPL1Q9BYD6 325 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 AKIRIN1Q9H9L7 192 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 NMRK1Q9NWW6 199 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 ASIC5Q9NY37 505 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 SLC12A4Q9UP95 1085 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 USH1CQ9Y6N9 552 aa14.03□□□□□ -0.16
SNRPA1-207ENST00000559309 AGRPO00253 132 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 RTCAO00442 366 aaKnown RBP14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 RGS14O43566 566 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 B3GALT4O96024 378 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 NTRK1P04629 796 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 IL1RNP18510 177 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 SPINK2P20155 84 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 LSP1P33241 339 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 RAB8AP61006 207 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 DEFB134Q4QY38 66 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 SPIN4Q56A73 249 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 C6orf136Q5SQH8 315 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 LCN10Q6JVE6 187 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 TRIM40Q6P9F5 258 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 FAM198BQ6UWH4 519 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 COMMD6Q7Z4G1 85 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 ZFAND4Q86XD8 727 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 ACOT4Q8N9L9 421 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 OR9A4Q8NGU2 314 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 ZCCHC10Q8TBK6 192 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 ACTRT2Q8TDY3 377 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 SERINC2Q96SA4 455 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 C17orf62Q9BQA9 187 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 SIKE1Q9BRV8 207 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 NUF2Q9BZD4 464 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 ULBP3Q9BZM4 244 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 TGIF2Q9GZN2 237 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 ROGDIQ9GZN7 287 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 C1orf109Q9NX04 203 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 MCM8Q9UJA3 840 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 TMED5Q9Y3A6 229 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 FIS1Q9Y3D6 152 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 NAALAD2Q9Y3Q0 740 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 SCN3AQ9NY46 2000 aa14.02□□□□□ -0.17
SNRPA1-207ENST00000559309 A0A0A6YYC8 382 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 VSTM2BA6NLU5 285 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 TRPC5OSA6NMA1 111 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 I3L1I5 382 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 CNOT3O75175 753 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 EEDO75530 441 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 SKAP2O75563 359 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 CRCPO75575 148 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 SERPIND1P05546 499 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 PLA2G16P53816 162 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 MTTPP55157 894 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 DCDP81605 110 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 TGM3Q08188 693 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 ABHD18Q0P651 414 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 RUNX2Q13950 521 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 PDCD2Q16342 344 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 TBC1D25Q3MII6 688 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 TUBB8Q3ZCM7 444 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 NKAIN1Q4KMZ8 207 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 SLC9B1Q4ZJI4 515 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 RFTN2Q52LD8 501 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 CLNKQ7Z7G1 428 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 NUDT13Q86X67 352 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 CA13Q8N1Q1 262 aa14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 C1orf52Q8N6N3 182 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-207ENST00000559309 CCT6BQ92526 530 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms