RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 NMRAL1Q9HBL8 299 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 SEC14L3Q9UDX4 400 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 MMACHCQ9Y4U1 282 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 TCRBV16S1A1N1A0A5B0 115 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 GABRR3A8MPY1 467 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 TAPBPO15533 448 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 ERI3O43414 337 aaKnown RBP16.65■□□□□ 0.26
TPM1-218ENST00000559281 B3GALT2O43825 422 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 EEF1DP29692 281 aaKnown RBP16.65■□□□□ 0.26
TPM1-218ENST00000559281 HSPA7P48741 367 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 TDGF1P3P51864 188 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 CKAP4Q07065 602 aaKnown RBP16.65■□□□□ 0.26
TPM1-218ENST00000559281 TGM3Q08188 693 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 OR1C1Q15619 314 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 PDK4Q16654 411 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 XKR6Q5GH73 641 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 HIST2H2BCQ6DN03 193 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 TRIM40Q6P9F5 258 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 TBC1D1Q86TI0 1168 aaPredicted RBP16.65■□□□□ 0.26
TPM1-218ENST00000559281 CA13Q8N1Q1 262 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 FAM98AQ8NCA5 519 aaKnown RBP16.65■□□□□ 0.26
TPM1-218ENST00000559281 MS4A6EQ96DS6 147 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 TMEM79Q9BSE2 394 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 EFCAB11Q9BUY7 163 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 REXO4Q9GZR2 422 aaKnown RBP16.65■□□□□ 0.26
TPM1-218ENST00000559281 PTBP2Q9UKA9 531 aaKnown RBP16.65■□□□□ 0.26
TPM1-218ENST00000559281 MRPS33Q9Y291 106 aaKnown RBP16.65■□□□□ 0.26
TPM1-218ENST00000559281 DOPEY1Q5JWR5 2465 aa16.65■□□□□ 0.26
TPM1-218ENST00000559281 IGKV3D-11A0A0A0MRZ8 115 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 SYNDIG1LA6NDD5 238 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 SAGE2PA6NJ88 616 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 FAM227AF5H4B4 570 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 CCNT2O60583 730 aaKnown RBP16.64■□□□□ 0.25
TPM1-218ENST00000559281 UNC5CO95185 931 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 CLDN1O95832 211 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 MAOAP21397 527 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 HSD17B7P56937 341 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 KCNK10P57789 538 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 IRF8Q02556 426 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 SLMAPQ14BN4 828 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 OR4D1Q15615 310 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 SPINK14Q6IE38 97 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 CCDC91Q7Z6B0 441 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 PDPRQ8NCN5 879 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 MDS2Q8NDY4 140 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 SRFBP1Q8NEF9 429 aaKnown RBP16.64■□□□□ 0.25
TPM1-218ENST00000559281 OR2L5Q8NG80 312 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 FBF1Q8TES7 1133 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 UBE2E3Q969T4 207 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 RELTQ969Z4 430 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 WDR34Q96EX3 536 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 DEFB126Q9BYW3 111 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 PRM3Q9NNZ6 103 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 KLHL1Q9NR64 748 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 ANKRD10Q9NXR5 420 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 LRFN1Q9P244 771 aa16.64■□□□□ 0.25
TPM1-218ENST00000559281 SCN3AQ9NY46 2000 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 FCHO1O14526 889 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 C1QAP02745 245 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 MST1P26927 711 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 HNRNPH1P31943 449 aaKnown RBP16.63■□□□□ 0.25
TPM1-218ENST00000559281 CYB561P49447 251 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 PLA2G16P53816 162 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 CASP6P55212 293 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 RUNX2Q13950 521 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 DOC2AQ14183 400 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 TBCCQ15814 346 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 KRTCAP3Q53RY4 240 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 SLC25A25Q6KCM7 469 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 LRRC70Q7Z2Q7 622 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 ZNF572Q7Z3I7 529 aaPredicted RBP16.63■□□□□ 0.25
TPM1-218ENST00000559281 FJX1Q86VR8 437 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 C17orf53Q8N3J3 647 aaPredicted RBP16.63■□□□□ 0.25
TPM1-218ENST00000559281 ESAMQ96AP7 390 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 SIGLEC12Q96PQ1 595 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 SERINC2Q96SA4 455 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 NPAS2Q99743 824 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 CD244Q9BZW8 370 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 ROGDIQ9GZN7 287 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 COPS7BQ9H9Q2 264 aaPredicted RBP16.63■□□□□ 0.25
TPM1-218ENST00000559281 NECTIN3Q9NQS3 549 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 PRTFDC1Q9NRG1 225 aa16.63■□□□□ 0.25
TPM1-218ENST00000559281 NOTCH2Q04721 2471 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 A0A0G2JN53 185 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 A8MUA0 341 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 SP1P08047 785 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 LTA4HP09960 611 aaKnown RBP16.62■□□□□ 0.25
TPM1-218ENST00000559281 TFEBP19484 476 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 CLCN2P51788 898 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 MTTPP55157 894 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 RAB38P57729 211 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 SLC13A2Q13183 592 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 CHIT1Q13231 466 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 TERF2Q15554 542 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 ZRSR2Q15696 482 aaKnown RBP16.62■□□□□ 0.25
TPM1-218ENST00000559281 ADPRMQ3LIE5 342 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 FBXO48Q5FWF7 155 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 C1QL3Q5VWW1 255 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 MTFR2Q6P444 385 aa16.62■□□□□ 0.25
TPM1-218ENST00000559281 ZDHHC24Q6UX98 284 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms