RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.54■□□□□ 0.249e-7■■■□□ 14.7
SMAD3-210ENST00000559092 PRDM9Q9NQV7 894 aa16.54■□□□□ 0.24
SMAD3-210ENST00000559092 NINJ2Q9NZG7 142 aa16.54■□□□□ 0.24
SMAD3-210ENST00000559092 MMACHCQ9Y4U1 282 aa16.54■□□□□ 0.24
SMAD3-210ENST00000559092 OR5H15A6NDH6 313 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 ANKUB1A6NFN9 424 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 K7EPI3 171 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 ERI3O43414 337 aaKnown RBP16.53■□□□□ 0.24
SMAD3-210ENST00000559092 SERPINB1P30740 379 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 HNRNPH1P31943 449 aaKnown RBP16.53■□□□□ 0.24
SMAD3-210ENST00000559092 ZNF33BQ06732 778 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 CHIT1Q13231 466 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 ELOAQ14241 798 aaKnown RBP16.53■□□□□ 0.24
SMAD3-210ENST00000559092 FBXO48Q5FWF7 155 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 ACER2Q5QJU3 275 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 KLC3Q6P597 504 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 TRIM40Q6P9F5 258 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 FAM180AQ6UWF9 173 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 VN1R5Q7Z5H4 357 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 CENPLQ8N0S6 344 aaPredicted RBP16.53■□□□□ 0.24
SMAD3-210ENST00000559092 LGI4Q8N135 537 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 SLC5A8Q8N695 610 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 BCORP1Q8N888 145 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 OR2L5Q8NG80 312 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 KIF18AQ8NI77 898 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 SUN3Q8TAQ9 357 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 PRR7Q8TB68 274 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 ADAMTS18Q8TE60 1221 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 IFT81Q8WYA0 676 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 CCT6BQ92526 530 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 FMO2Q99518 471 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 KCNK13Q9HB14 408 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 SNX15Q9NRS6 342 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 ABI3Q9P2A4 366 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 CNTRLQ7Z7A1 2325 aa16.53■□□□□ 0.24
SMAD3-210ENST00000559092 USP9YO00507 2555 aaPredicted RBP16.53■□□□□ 0.24
SMAD3-210ENST00000559092 A0A096LPK6 155 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 IGKV3D-11A0A0A0MRZ8 115 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 TCRBV16S1A1N1A0A5B0 115 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 SYNDIG1LA6NDD5 238 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 SUPT3HB4E1H0 165 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 C4orf51C9J302 202 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 UBXN8O00124 270 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 B3GALT2O43825 422 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 SUPT3HO75486 399 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 KLHL2O95198 593 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 TBX6O95947 436 aaPredicted RBP16.52■□□□□ 0.24
SMAD3-210ENST00000559092 MTHFD2P13995 350 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 EDN3P14138 238 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 EPORP19235 508 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 CD22P20273 847 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 TYK2P29597 1187 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 GMPRP36959 345 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 SERPINB8P50452 374 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 SLC26A5P58743 744 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 TAS2R50P59544 299 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 BTG2P78543 158 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 RUNX2Q13950 521 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 RCN2Q14257 317 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 MEP1AQ16819 746 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 SRFBP1Q8NEF9 429 aaKnown RBP16.52■□□□□ 0.24
SMAD3-210ENST00000559092 KCTD4Q8WVF5 259 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 EXT2Q93063 718 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 MRRFQ96E11 262 aaKnown RBP16.52■□□□□ 0.24
SMAD3-210ENST00000559092 QRFPRQ96P65 431 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 SERINC2Q96SA4 455 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 ROGDIQ9GZN7 287 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 OPTCQ9UBM4 332 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 PCDHGB6Q9Y5F9 930 aa16.52■□□□□ 0.24
SMAD3-210ENST00000559092 NUP210LQ5VU65 1888 aa16.52■□□□□ 0.23
SMAD3-210ENST00000559092 FAM227AF5H4B4 570 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 CLDN4O14493 209 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 PRAMEF2O60811 474 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 SEMA7AO75326 666 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 DDAH2O95865 285 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 EPB42P16452 691 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 PLA2G16P53816 162 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 HSD17B7P56937 341 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 BMPR2Q13873 1038 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 TERF2Q15554 542 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 UAP1Q16222 522 aaPredicted RBP16.51■□□□□ 0.23
SMAD3-210ENST00000559092 TMEM35AQ53FP2 167 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 METTL2BQ6P1Q9 378 aaKnown RBP16.51■□□□□ 0.23
SMAD3-210ENST00000559092 ABHD17CQ6PCB6 329 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 LAS2Q8IYD9 372 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 ELP5Q8TE02 316 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 SSC4DQ8WTU2 575 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 SLC44A1Q8WWI5 657 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 GPR78Q96P69 363 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 CDC42EP4Q9H3Q1 356 aaKnown RBP16.51■□□□□ 0.23
SMAD3-210ENST00000559092 ADGRE2Q9UHX3 823 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 MRPS33Q9Y291 106 aaKnown RBP16.51■□□□□ 0.23
SMAD3-210ENST00000559092 ASB1Q9Y576 335 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 IKBKGQ9Y6K9 419 aa16.51■□□□□ 0.23
SMAD3-210ENST00000559092 DOCK10Q96BY6 2186 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 SHANK1Q9Y566 2161 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 KLK8O60259 260 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 ACSL3O95573 720 aa16.5■□□□□ 0.23
SMAD3-210ENST00000559092 ALDOAP04075 364 aaKnown RBP16.5■□□□□ 0.23
SMAD3-210ENST00000559092 INHBAP08476 426 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms