RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 FAAH2Q6GMR7 532 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 ABHD17CQ6PCB6 329 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 CHSY3Q70JA7 882 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 IQCKQ8N0W5 287 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 CCNYL1Q8N7R7 359 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 EXD3Q8N9H8 876 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 BANPQ8N9N5 519 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 LSM14AQ8ND56 463 aaKnown RBP11.67□□□□□ -0.54
SMAD3-205ENST00000558428 SRFBP1Q8NEF9 429 aaKnown RBP11.67□□□□□ -0.54
SMAD3-205ENST00000558428 WDR20Q8TBZ3 569 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 RDH11Q8TC12 318 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 ZBTB9Q96C00 473 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 MTFMTQ96DP5 389 aaKnown RBP11.67□□□□□ -0.54
SMAD3-205ENST00000558428 L3HYPDHQ96EM0 354 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 VPS50Q96JG6 964 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 MAGEB10Q96LZ2 347 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-205ENST00000558428 FER1L6-AS2Q96M78 137 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 OR1F2PQ96R84 312 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 TRIM55Q9BYV6 548 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 VN1R1Q9GZP7 353 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 ADNPQ9H2P0 1102 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 OR51B5Q9H339 312 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 CENPHQ9H3R5 247 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 COPS7BQ9H9Q2 264 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-205ENST00000558428 CLK4Q9HAZ1 481 aaKnown RBP11.67□□□□□ -0.54
SMAD3-205ENST00000558428 DMRT3Q9NQL9 472 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 FBXL4Q9UKA2 621 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 PLLPQ9Y342 182 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 TSC22D4Q9Y3Q8 395 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 SPTA1P02549 2419 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 A0A1B0GTL3 188 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 MAGEB17A8MXT2 336 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 PSMD12O00232 456 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 SAP18O00422 153 aaKnown RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 B3GALT2O43825 422 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 ALOX12BO75342 701 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 CDC123O75794 336 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 OR4F21O95013 312 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 MLYCDO95822 493 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 FHP07954 510 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 RNH1P13489 461 aaKnown RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 ACPPP15309 386 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 IL10P22301 178 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 CERS1P27544 350 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 CCL11P51671 97 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 NEK2P51955 445 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 RAP1GDS1P52306 607 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 MTTPP55157 894 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 RPS13P62277 151 aaKnown RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 IFT88Q13099 833 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 TUBB8Q3ZCM7 444 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 TMEM35AQ53FP2 167 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 SOWAHCQ53LP3 525 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 DCAF10Q5QP82 559 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 BEND6Q5SZJ8 279 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 DEPDC1Q5TB30 811 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 KHDRBS2Q5VWX1 349 aaKnown RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 FRG2Q64ET8 278 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 LETMD1Q6P1Q0 360 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 KIRREL2Q6UWL6 708 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 LRIG3Q6UXM1 1119 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 CROCCP2Q86T23 111 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 CA13Q8N1Q1 262 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 CLEC1AQ8NC01 280 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 ARMC2Q8NEN0 867 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 METTL21AQ8WXB1 218 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 TBC1D20Q96BZ9 403 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 C8orf44Q96CB5 159 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 QRFPRQ96P65 431 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 KCNC2Q96PR1 638 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 FAM111AQ96PZ2 611 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 FRG2BQ96QU4 278 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 ZNF382Q96SR6 550 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 MESP1Q9BRJ9 268 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 CENPKQ9BS16 269 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 TBCDQ9BTW9 1192 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 NPLQ9BXD5 320 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 ROGDIQ9GZN7 287 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 SENP1Q9P0U3 644 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 STK38LQ9Y2H1 464 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 TLN1Q9Y490 2541 aaKnown RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 TNRC6AQ8NDV7 1962 aaKnown RBP11.66□□□□□ -0.54
SMAD3-205ENST00000558428 CNTRLQ7Z7A1 2325 aa11.66□□□□□ -0.54
SMAD3-205ENST00000558428 OR2W5A6NFC9 320 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 EIF4E1BA6NMX2 242 aaKnown RBP11.65□□□□□ -0.54
SMAD3-205ENST00000558428 MKRN2OSH3BPM6 223 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 MASP2O00187 686 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 FOXE1O00358 373 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-205ENST00000558428 RTCAO00442 366 aaKnown RBP11.65□□□□□ -0.54
SMAD3-205ENST00000558428 PCDH17O14917 1159 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 CYC1P08574 325 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 C8orf89P0DMQ9 161 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 SFTPCP11686 197 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 CREB1P16220 341 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 JAK1P23458 1154 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 PTX3P26022 381 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-205ENST00000558428 SSR2P43308 183 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 EFNA3P52797 238 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 NAGLUP54802 743 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms